Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 AL022328.1-201ENST00000610050 478 ntBASIC15.77■□□□□ 0.12
OPHN1O60890 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.77■□□□□ 0.12
OPHN1O60890 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.77■□□□□ 0.12
OPHN1O60890 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
OPHN1O60890 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
OPHN1O60890 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
OPHN1O60890 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.77■□□□□ 0.11
OPHN1O60890 FGD5P1-202ENST00000614866 2498 ntBASIC15.77■□□□□ 0.11
OPHN1O60890 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
OPHN1O60890 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
OPHN1O60890 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
OPHN1O60890 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
OPHN1O60890 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
OPHN1O60890 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
OPHN1O60890 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
OPHN1O60890 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
OPHN1O60890 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
OPHN1O60890 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
OPHN1O60890 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
OPHN1O60890 KRT8P22-201ENST00000562317 1415 ntBASIC15.77■□□□□ 0.11
OPHN1O60890 ACE3P-201ENST00000423435 1973 ntBASIC15.76■□□□□ 0.11
OPHN1O60890 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
OPHN1O60890 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
OPHN1O60890 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
OPHN1O60890 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
OPHN1O60890 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
OPHN1O60890 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.76■□□□□ 0.11
OPHN1O60890 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.76■□□□□ 0.11
OPHN1O60890 REXO1L4P-201ENST00000605109 1937 ntBASIC15.76■□□□□ 0.11
OPHN1O60890 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
OPHN1O60890 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
OPHN1O60890 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
OPHN1O60890 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.76■□□□□ 0.11
OPHN1O60890 AC092933.1-201ENST00000393644 945 ntBASIC15.76■□□□□ 0.11
OPHN1O60890 MIR1908-201ENST00000410394 80 ntBASIC15.76■□□□□ 0.11
OPHN1O60890 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.76■□□□□ 0.11
OPHN1O60890 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.76■□□□□ 0.11
OPHN1O60890 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.76■□□□□ 0.11
OPHN1O60890 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.76■□□□□ 0.11
OPHN1O60890 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
OPHN1O60890 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
OPHN1O60890 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
OPHN1O60890 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.76■□□□□ 0.11
OPHN1O60890 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.76■□□□□ 0.11
OPHN1O60890 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.76■□□□□ 0.11
OPHN1O60890 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.76■□□□□ 0.11
OPHN1O60890 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
OPHN1O60890 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
OPHN1O60890 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
OPHN1O60890 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
OPHN1O60890 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
OPHN1O60890 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
OPHN1O60890 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
OPHN1O60890 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
OPHN1O60890 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
OPHN1O60890 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
OPHN1O60890 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.76■□□□□ 0.11
OPHN1O60890 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
OPHN1O60890 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
OPHN1O60890 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
OPHN1O60890 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
OPHN1O60890 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
OPHN1O60890 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
OPHN1O60890 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
OPHN1O60890 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
OPHN1O60890 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
OPHN1O60890 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.75■□□□□ 0.11
OPHN1O60890 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
OPHN1O60890 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
OPHN1O60890 TUBB1P2-201ENST00000422712 1306 ntBASIC15.75■□□□□ 0.11
OPHN1O60890 TUBB1P1-201ENST00000503144 1300 ntBASIC15.75■□□□□ 0.11
OPHN1O60890 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
OPHN1O60890 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
OPHN1O60890 DKFZP434A062-201ENST00000573103 5021 ntBASIC15.75■□□□□ 0.11
OPHN1O60890 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
OPHN1O60890 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.75■□□□□ 0.11
OPHN1O60890 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
OPHN1O60890 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
OPHN1O60890 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
OPHN1O60890 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
OPHN1O60890 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
OPHN1O60890 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
OPHN1O60890 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.75■□□□□ 0.11
OPHN1O60890 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.75■□□□□ 0.11
OPHN1O60890 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
OPHN1O60890 AC036164.1-201ENST00000570544 333 ntBASIC15.75■□□□□ 0.11
OPHN1O60890 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.75■□□□□ 0.11
OPHN1O60890 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.75■□□□□ 0.11
OPHN1O60890 AC133539.2-201ENST00000604757 467 ntBASIC15.75■□□□□ 0.11
OPHN1O60890 AL158212.4-201ENST00000624062 1286 ntBASIC15.75■□□□□ 0.11
OPHN1O60890 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.75■□□□□ 0.11
OPHN1O60890 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
OPHN1O60890 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
OPHN1O60890 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
OPHN1O60890 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
OPHN1O60890 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
OPHN1O60890 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
OPHN1O60890 AC020907.1-201ENST00000616460 1350 ntBASIC15.75■□□□□ 0.11
OPHN1O60890 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
OPHN1O60890 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms