Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.46□□□□□ -0.26
ZIC3O60481 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
ZIC3O60481 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
ZIC3O60481 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
ZIC3O60481 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ZIC3O60481 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
ZIC3O60481 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
ZIC3O60481 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
ZIC3O60481 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.46□□□□□ -0.26
ZIC3O60481 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.26
ZIC3O60481 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ZIC3O60481 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ZIC3O60481 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ZIC3O60481 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ZIC3O60481 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ZIC3O60481 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
ZIC3O60481 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
ZIC3O60481 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
ZIC3O60481 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.45□□□□□ -0.26
ZIC3O60481 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ZIC3O60481 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
ZIC3O60481 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ZIC3O60481 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ZIC3O60481 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.45□□□□□ -0.26
ZIC3O60481 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
ZIC3O60481 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
ZIC3O60481 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ZIC3O60481 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.45□□□□□ -0.26
ZIC3O60481 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.45□□□□□ -0.26
ZIC3O60481 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
ZIC3O60481 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ZIC3O60481 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ZIC3O60481 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ZIC3O60481 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.45□□□□□ -0.26
ZIC3O60481 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
ZIC3O60481 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.45□□□□□ -0.26
ZIC3O60481 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ZIC3O60481 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.45□□□□□ -0.26
ZIC3O60481 MTX1P1-201ENST00000440904 838 ntBASIC13.45□□□□□ -0.26
ZIC3O60481 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ZIC3O60481 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.45□□□□□ -0.26
ZIC3O60481 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.45□□□□□ -0.26
ZIC3O60481 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.45□□□□□ -0.26
ZIC3O60481 MIR4538-201ENST00000581377 78 ntBASIC13.45□□□□□ -0.26
ZIC3O60481 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.45□□□□□ -0.26
ZIC3O60481 AC091271.1-201ENST00000611877 1162 ntBASIC13.45□□□□□ -0.26
ZIC3O60481 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ZIC3O60481 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.45□□□□□ -0.26
ZIC3O60481 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
ZIC3O60481 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ZIC3O60481 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ZIC3O60481 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ZIC3O60481 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.45□□□□□ -0.26
ZIC3O60481 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.45□□□□□ -0.26
ZIC3O60481 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ZIC3O60481 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ZIC3O60481 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.45□□□□□ -0.26
ZIC3O60481 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.45□□□□□ -0.26
ZIC3O60481 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.44□□□□□ -0.26
ZIC3O60481 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
ZIC3O60481 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZIC3O60481 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ZIC3O60481 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
ZIC3O60481 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZIC3O60481 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZIC3O60481 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
ZIC3O60481 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZIC3O60481 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZIC3O60481 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.44□□□□□ -0.26
ZIC3O60481 CICP14-201ENST00000629111 2732 ntBASIC13.44□□□□□ -0.26
ZIC3O60481 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZIC3O60481 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.44□□□□□ -0.26
ZIC3O60481 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZIC3O60481 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZIC3O60481 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ZIC3O60481 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.44□□□□□ -0.26
ZIC3O60481 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.44□□□□□ -0.26
ZIC3O60481 AC010141.1-201ENST00000411585 623 ntBASIC13.44□□□□□ -0.26
ZIC3O60481 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ZIC3O60481 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.44□□□□□ -0.26
ZIC3O60481 HSPB1P2-201ENST00000448722 546 ntBASIC13.44□□□□□ -0.26
ZIC3O60481 AC108725.1-201ENST00000495472 409 ntBASIC13.44□□□□□ -0.26
ZIC3O60481 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.44□□□□□ -0.26
ZIC3O60481 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.44□□□□□ -0.26
ZIC3O60481 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.44□□□□□ -0.26
ZIC3O60481 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.44□□□□□ -0.26
ZIC3O60481 AC008825.2-201ENST00000603374 718 ntBASIC13.44□□□□□ -0.26
ZIC3O60481 AL096828.3-201ENST00000615354 462 ntBASIC13.44□□□□□ -0.26
ZIC3O60481 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.44□□□□□ -0.26
ZIC3O60481 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZIC3O60481 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZIC3O60481 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZIC3O60481 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ZIC3O60481 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.44□□□□□ -0.26
ZIC3O60481 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.44□□□□□ -0.26
ZIC3O60481 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ZIC3O60481 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.44□□□□□ -0.26
ZIC3O60481 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ZIC3O60481 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ZIC3O60481 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms