Protein–RNA interactions for Protein: O15534

PER1, Period circadian protein homolog 1, humanhuman

Predicted RBP Predictions only

Length 1,290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER1O15534 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC20.09■□□□□ 0.81
PER1O15534 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PER1O15534 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PER1O15534 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PER1O15534 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PER1O15534 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PER1O15534 HNRNPA1P27-201ENST00000412087 955 ntBASIC20.09■□□□□ 0.81
PER1O15534 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC20.09■□□□□ 0.81
PER1O15534 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PER1O15534 AC092658.1-201ENST00000505836 891 ntBASIC20.09■□□□□ 0.81
PER1O15534 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PER1O15534 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PER1O15534 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PER1O15534 AL008638.5-201ENST00000623814 1298 ntBASIC20.09■□□□□ 0.81
PER1O15534 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC20.09■□□□□ 0.81
PER1O15534 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PER1O15534 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PER1O15534 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PER1O15534 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PER1O15534 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PER1O15534 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PER1O15534 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC20.09■□□□□ 0.81
PER1O15534 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC20.09■□□□□ 0.81
PER1O15534 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PER1O15534 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PER1O15534 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PER1O15534 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC20.08■□□□□ 0.81
PER1O15534 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PER1O15534 USP28-214ENST00000545540 3431 ntTSL 2 BASIC20.08■□□□□ 0.81
PER1O15534 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
PER1O15534 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
PER1O15534 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PER1O15534 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.81
PER1O15534 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
PER1O15534 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
PER1O15534 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
PER1O15534 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PER1O15534 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC20.08■□□□□ 0.81
PER1O15534 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
PER1O15534 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC20.08■□□□□ 0.81
PER1O15534 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PER1O15534 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC20.08■□□□□ 0.81
PER1O15534 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC20.08■□□□□ 0.81
PER1O15534 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PER1O15534 MIR6074-201ENST00000612054 107 ntBASIC20.08■□□□□ 0.81
PER1O15534 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC20.08■□□□□ 0.8
PER1O15534 STK24-203ENST00000397517 4578 ntTSL 2 BASIC20.08■□□□□ 0.8
PER1O15534 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
PER1O15534 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC20.08■□□□□ 0.8
PER1O15534 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PER1O15534 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PER1O15534 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PER1O15534 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
PER1O15534 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC20.08■□□□□ 0.8
PER1O15534 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PER1O15534 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
PER1O15534 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PER1O15534 FAS-202ENST00000352159 1722 ntTSL 5 BASIC20.07■□□□□ 0.8
PER1O15534 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC20.07■□□□□ 0.8
PER1O15534 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
PER1O15534 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PER1O15534 ADK-205ENST00000539909 1866 ntTSL 2 BASIC20.07■□□□□ 0.8
PER1O15534 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC20.07■□□□□ 0.8
PER1O15534 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PER1O15534 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PER1O15534 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PER1O15534 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC20.07■□□□□ 0.8
PER1O15534 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC20.07■□□□□ 0.8
PER1O15534 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PER1O15534 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PER1O15534 RPS3-201ENST00000278572 907 ntTSL 3 BASIC20.07■□□□□ 0.8
PER1O15534 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PER1O15534 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PER1O15534 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PER1O15534 DPM3-202ENST00000368399 517 ntBASIC20.07■□□□□ 0.8
PER1O15534 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PER1O15534 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PER1O15534 KRTAP10-13P-201ENST00000412914 571 ntBASIC20.07■□□□□ 0.8
PER1O15534 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC20.07■□□□□ 0.8
PER1O15534 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC20.07■□□□□ 0.8
PER1O15534 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC20.07■□□□□ 0.8
PER1O15534 HLA-J-204ENST00000495278 958 ntBASIC20.07■□□□□ 0.8
PER1O15534 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PER1O15534 SORD2P-201ENST00000558556 1069 ntBASIC20.07■□□□□ 0.8
PER1O15534 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PER1O15534 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
PER1O15534 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC20.07■□□□□ 0.8
PER1O15534 AC091271.1-201ENST00000611877 1162 ntBASIC20.07■□□□□ 0.8
PER1O15534 AC007686.3-201ENST00000619017 3487 ntBASIC20.07■□□□□ 0.8
PER1O15534 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PER1O15534 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PER1O15534 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PER1O15534 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC20.07■□□□□ 0.8
PER1O15534 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
PER1O15534 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PER1O15534 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PER1O15534 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PER1O15534 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PER1O15534 FAM90A7P-201ENST00000382628 1395 ntBASIC20.07■□□□□ 0.8
PER1O15534 FAM90A23P-201ENST00000400136 1395 ntBASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms