Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC13.12□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.12□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC13.12□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC13.12□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC13.12□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC13.12□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 Z98257.2-202ENST00000641138 1548 ntBASIC13.12□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.12□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.12□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 SOX30-201ENST00000265007 3265 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13.12□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC13.12□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 AL031432.4-201ENST00000641729 2190 ntBASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 AC008806.1-201ENST00000624962 2443 ntBASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 PSMD2-205ENST00000435761 2574 ntTSL 2 BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 SPDYE13P-201ENST00000445314 798 ntBASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 GUSBP12-201ENST00000513727 720 ntBASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 RNF126P1-202ENST00000569893 925 ntBASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 ARL16-209ENST00000573715 763 ntTSL 3 BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 ARL16-211ENST00000576135 694 ntTSL 3 BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 ALDH8A1-203ENST00000367845 2383 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 AP002986.1-201ENST00000602376 1763 ntTSL 5 BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 TMPRSS13-201ENST00000430170 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 KIAA1324-210ENST00000529753 2903 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 AL354702.1-201ENST00000442006 1960 ntBASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
BOLA2-SMG1P6H3BVE0 STRA6-204ENST00000423167 2776 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms