Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC66A2RUB6 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC66A2RUB6 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC66A2RUB6 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.39■□□□□ 0.21
CCDC66A2RUB6 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CCDC66A2RUB6 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC66A2RUB6 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC66A2RUB6 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC66A2RUB6 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CCDC66A2RUB6 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.39■□□□□ 0.21
CCDC66A2RUB6 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC66A2RUB6 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC66A2RUB6 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.39■□□□□ 0.21
CCDC66A2RUB6 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.39■□□□□ 0.21
CCDC66A2RUB6 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
CCDC66A2RUB6 AL513210.1-201ENST00000629608 234 ntBASIC16.39■□□□□ 0.21
CCDC66A2RUB6 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CCDC66A2RUB6 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC66A2RUB6 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC66A2RUB6 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CCDC66A2RUB6 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC66A2RUB6 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CCDC66A2RUB6 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC66A2RUB6 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
CCDC66A2RUB6 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC66A2RUB6 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC66A2RUB6 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC66A2RUB6 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC66A2RUB6 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC66A2RUB6 AL035456.1-201ENST00000456064 1369 ntBASIC16.38■□□□□ 0.21
CCDC66A2RUB6 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC66A2RUB6 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CCDC66A2RUB6 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC66A2RUB6 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC66A2RUB6 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC66A2RUB6 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CCDC66A2RUB6 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC66A2RUB6 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC66A2RUB6 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC66A2RUB6 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC66A2RUB6 AL627223.1-201ENST00000416693 442 ntBASIC16.38■□□□□ 0.21
CCDC66A2RUB6 FAM58DP-201ENST00000428076 619 ntBASIC16.38■□□□□ 0.21
CCDC66A2RUB6 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.38■□□□□ 0.21
CCDC66A2RUB6 DNAJB3-201ENST00000446806 729 ntBASIC16.38■□□□□ 0.21
CCDC66A2RUB6 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.38■□□□□ 0.21
CCDC66A2RUB6 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.38■□□□□ 0.21
CCDC66A2RUB6 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.38■□□□□ 0.21
CCDC66A2RUB6 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.38■□□□□ 0.21
CCDC66A2RUB6 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.38■□□□□ 0.21
CCDC66A2RUB6 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.38■□□□□ 0.21
CCDC66A2RUB6 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC66A2RUB6 MIR3687-2-201ENST00000577708 61 ntBASIC16.38■□□□□ 0.21
CCDC66A2RUB6 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
CCDC66A2RUB6 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
CCDC66A2RUB6 AL133215.2-201ENST00000609242 977 ntBASIC16.38■□□□□ 0.21
CCDC66A2RUB6 MIR3687-1-201ENST00000614492 61 ntBASIC16.38■□□□□ 0.21
CCDC66A2RUB6 AC007967.4-201ENST00000614700 386 ntBASIC16.38■□□□□ 0.21
CCDC66A2RUB6 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC66A2RUB6 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC66A2RUB6 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CCDC66A2RUB6 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC66A2RUB6 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.38■□□□□ 0.21
CCDC66A2RUB6 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.38■□□□□ 0.21
CCDC66A2RUB6 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC16.38■□□□□ 0.21
CCDC66A2RUB6 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC66A2RUB6 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC66A2RUB6 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
CCDC66A2RUB6 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC66A2RUB6 KRT8P12-202ENST00000472924 1397 ntBASIC16.38■□□□□ 0.21
CCDC66A2RUB6 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.38■□□□□ 0.21
CCDC66A2RUB6 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCDC66A2RUB6 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC66A2RUB6 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
CCDC66A2RUB6 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC66A2RUB6 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CCDC66A2RUB6 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
CCDC66A2RUB6 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CCDC66A2RUB6 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.37■□□□□ 0.21
CCDC66A2RUB6 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CCDC66A2RUB6 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CCDC66A2RUB6 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC66A2RUB6 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC66A2RUB6 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC66A2RUB6 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC66A2RUB6 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC66A2RUB6 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC66A2RUB6 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.37■□□□□ 0.21
CCDC66A2RUB6 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC66A2RUB6 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.37■□□□□ 0.21
CCDC66A2RUB6 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.37■□□□□ 0.21
CCDC66A2RUB6 TARDBPP1-201ENST00000442013 1203 ntBASIC16.37■□□□□ 0.21
CCDC66A2RUB6 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.37■□□□□ 0.21
CCDC66A2RUB6 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC66A2RUB6 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.37■□□□□ 0.21
CCDC66A2RUB6 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.37■□□□□ 0.21
CCDC66A2RUB6 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.37■□□□□ 0.21
CCDC66A2RUB6 AC010327.4-202ENST00000591484 748 ntBASIC16.37■□□□□ 0.21
CCDC66A2RUB6 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCDC66A2RUB6 RN7SL828P-201ENST00000607615 303 ntBASIC16.37■□□□□ 0.21
CCDC66A2RUB6 AC003101.2-201ENST00000612557 442 ntBASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms