Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TRBV6-7A0A0A0MS04 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 AC107890.1-201ENST00000422478 521 ntBASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 AC004967.1-201ENST00000453589 447 ntBASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 AC092865.5-201ENST00000545435 363 ntBASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 AC025678.2-201ENST00000562061 970 ntBASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 AL596442.2-201ENST00000610240 980 ntBASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 AC093525.8-201ENST00000624099 1342 ntBASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
TRBV6-7A0A0A0MS04 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.58□□□□□ -0.39
TRBV6-7A0A0A0MS04 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
TRBV6-7A0A0A0MS04 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
TRBV6-7A0A0A0MS04 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
TRBV6-7A0A0A0MS04 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
TRBV6-7A0A0A0MS04 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 AL645937.2-201ENST00000396808 931 ntBASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 KRT18P13-201ENST00000400056 1290 ntBASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 MEIS3P1-201ENST00000495167 958 ntBASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 RAB35-202ENST00000534951 939 ntTSL 2 BASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 AL158211.3-201ENST00000607385 239 ntBASIC12.58□□□□□ -0.4
TRBV6-7A0A0A0MS04 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms