Protein–RNA interactions for Protein: Q9Y4C2

TCAF1, TRPM8 channel-associated factor 1, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCAF1Q9Y4C2 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.09■□□□□ 0.01
TCAF1Q9Y4C2 AC004466.1-201ENST00000599515 1080 ntBASIC15.09■□□□□ 0.01
TCAF1Q9Y4C2 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TCAF1Q9Y4C2 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TCAF1Q9Y4C2 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.09■□□□□ 0.01
TCAF1Q9Y4C2 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
TCAF1Q9Y4C2 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.09■□□□□ 0.01
TCAF1Q9Y4C2 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.09■□□□□ 0.01
TCAF1Q9Y4C2 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCAF1Q9Y4C2 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCAF1Q9Y4C2 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TCAF1Q9Y4C2 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.09■□□□□ 0.01
TCAF1Q9Y4C2 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCAF1Q9Y4C2 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TCAF1Q9Y4C2 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCAF1Q9Y4C2 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCAF1Q9Y4C2 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
TCAF1Q9Y4C2 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TCAF1Q9Y4C2 AC003102.2-201ENST00000589195 1469 ntBASIC15.08■□□□□ 0.01
TCAF1Q9Y4C2 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.08■□□□□ 0.01
TCAF1Q9Y4C2 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.08■□□□□ 0.01
TCAF1Q9Y4C2 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.08■□□□□ 0.01
TCAF1Q9Y4C2 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
TCAF1Q9Y4C2 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
TCAF1Q9Y4C2 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TCAF1Q9Y4C2 MIR600HG-201ENST00000449175 5984 ntBASIC15.08■□□□□ 0
TCAF1Q9Y4C2 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.08■□□□□ 0
TCAF1Q9Y4C2 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.08■□□□□ 0
TCAF1Q9Y4C2 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TCAF1Q9Y4C2 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.08■□□□□ 0
TCAF1Q9Y4C2 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.08■□□□□ 0
TCAF1Q9Y4C2 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TCAF1Q9Y4C2 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.08■□□□□ 0
TCAF1Q9Y4C2 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.08■□□□□ 0
TCAF1Q9Y4C2 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.08■□□□□ 0
TCAF1Q9Y4C2 TLE1P1-201ENST00000422965 589 ntBASIC15.08■□□□□ 0
TCAF1Q9Y4C2 AC007969.1-201ENST00000433675 447 ntBASIC15.08■□□□□ 0
TCAF1Q9Y4C2 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.08■□□□□ 0
TCAF1Q9Y4C2 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.08■□□□□ 0
TCAF1Q9Y4C2 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
TCAF1Q9Y4C2 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC15.08■□□□□ 0
TCAF1Q9Y4C2 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.08■□□□□ 0
TCAF1Q9Y4C2 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.08■□□□□ 0
TCAF1Q9Y4C2 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.08■□□□□ 0
TCAF1Q9Y4C2 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.08■□□□□ 0
TCAF1Q9Y4C2 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TCAF1Q9Y4C2 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TCAF1Q9Y4C2 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.08■□□□□ 0
TCAF1Q9Y4C2 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TCAF1Q9Y4C2 MSTO2P-201ENST00000314835 1709 ntBASIC15.08■□□□□ 0
TCAF1Q9Y4C2 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0
TCAF1Q9Y4C2 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TCAF1Q9Y4C2 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.08■□□□□ 0
TCAF1Q9Y4C2 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.08■□□□□ 0
TCAF1Q9Y4C2 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
TCAF1Q9Y4C2 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TCAF1Q9Y4C2 SALL4P5-201ENST00000419001 1760 ntBASIC15.08■□□□□ 0
TCAF1Q9Y4C2 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
TCAF1Q9Y4C2 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TCAF1Q9Y4C2 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TCAF1Q9Y4C2 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
TCAF1Q9Y4C2 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TCAF1Q9Y4C2 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TCAF1Q9Y4C2 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
TCAF1Q9Y4C2 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TCAF1Q9Y4C2 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.07■□□□□ 0
TCAF1Q9Y4C2 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.07■□□□□ 0
TCAF1Q9Y4C2 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.07■□□□□ 0
TCAF1Q9Y4C2 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TCAF1Q9Y4C2 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TCAF1Q9Y4C2 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.07■□□□□ 0
TCAF1Q9Y4C2 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
TCAF1Q9Y4C2 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
TCAF1Q9Y4C2 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TCAF1Q9Y4C2 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TCAF1Q9Y4C2 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
TCAF1Q9Y4C2 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.07■□□□□ 0
TCAF1Q9Y4C2 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TCAF1Q9Y4C2 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.07■□□□□ 0
TCAF1Q9Y4C2 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.07■□□□□ 0
TCAF1Q9Y4C2 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
TCAF1Q9Y4C2 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TCAF1Q9Y4C2 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
TCAF1Q9Y4C2 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TCAF1Q9Y4C2 FO681548.1-201ENST00000455617 1132 ntBASIC15.07■□□□□ 0
TCAF1Q9Y4C2 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
TCAF1Q9Y4C2 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.07■□□□□ 0
TCAF1Q9Y4C2 RPSAP52-203ENST00000622976 1023 ntBASIC15.07■□□□□ 0
TCAF1Q9Y4C2 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TCAF1Q9Y4C2 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.07■□□□□ 0
TCAF1Q9Y4C2 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.07■□□□□ 0
TCAF1Q9Y4C2 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TCAF1Q9Y4C2 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TCAF1Q9Y4C2 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TCAF1Q9Y4C2 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
TCAF1Q9Y4C2 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
TCAF1Q9Y4C2 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TCAF1Q9Y4C2 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TCAF1Q9Y4C2 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.07■□□□□ 0
TCAF1Q9Y4C2 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms