Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 BEX3-201ENST00000361298 921 ntTSL 2 BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 PTMS-202ENST00000389462 773 ntTSL 2 BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 AC104457.1-201ENST00000401024 814 ntBASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 AL355306.1-201ENST00000415580 579 ntBASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 AL353705.2-201ENST00000428243 662 ntBASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 INO80E-210ENST00000567705 880 ntTSL 3 BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 AC012313.10-201ENST00000623509 926 ntBASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.65□□□□□ -0.38
KCNIP3Q9Y2W7 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC12.65□□□□□ -0.39
KCNIP3Q9Y2W7 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
KCNIP3Q9Y2W7 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.65□□□□□ -0.39
KCNIP3Q9Y2W7 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.65□□□□□ -0.39
KCNIP3Q9Y2W7 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
KCNIP3Q9Y2W7 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
KCNIP3Q9Y2W7 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 SPDYE11-202ENST00000450699 704 ntBASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 AC106730.1-201ENST00000566722 1090 ntBASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 SPDYE9P-201ENST00000570642 692 ntBASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 AP001005.1-201ENST00000571755 1248 ntBASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC12.64□□□□□ -0.39
KCNIP3Q9Y2W7 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms