Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC14.37□□□□□ -0.11
LRCH1Q9Y2L9 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 AL354702.1-201ENST00000442006 1960 ntBASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 AC009947.1-201ENST00000444350 727 ntBASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 RPS15P9-201ENST00000494093 319 ntBASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 AC002347.1-201ENST00000569543 541 ntBASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 AC008667.4-201ENST00000607370 168 ntBASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 AC131212.3-201ENST00000624087 4219 ntBASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 AC106818.1-201ENST00000623223 3242 ntBASIC14.36□□□□□ -0.11
LRCH1Q9Y2L9 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC14.35□□□□□ -0.11
LRCH1Q9Y2L9 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRCH1Q9Y2L9 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRCH1Q9Y2L9 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRCH1Q9Y2L9 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.35□□□□□ -0.11
LRCH1Q9Y2L9 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRCH1Q9Y2L9 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRCH1Q9Y2L9 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
LRCH1Q9Y2L9 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
LRCH1Q9Y2L9 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.35□□□□□ -0.11
LRCH1Q9Y2L9 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRCH1Q9Y2L9 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC14.35□□□□□ -0.11
LRCH1Q9Y2L9 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRCH1Q9Y2L9 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.35□□□□□ -0.11
LRCH1Q9Y2L9 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRCH1Q9Y2L9 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.35□□□□□ -0.11
LRCH1Q9Y2L9 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.35□□□□□ -0.11
LRCH1Q9Y2L9 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.35□□□□□ -0.11
LRCH1Q9Y2L9 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.35□□□□□ -0.11
LRCH1Q9Y2L9 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.35□□□□□ -0.11
LRCH1Q9Y2L9 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
LRCH1Q9Y2L9 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.35□□□□□ -0.11
LRCH1Q9Y2L9 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.35□□□□□ -0.11
LRCH1Q9Y2L9 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.35□□□□□ -0.11
LRCH1Q9Y2L9 AL671883.3-201ENST00000603274 991 ntBASIC14.35□□□□□ -0.11
LRCH1Q9Y2L9 AL031055.1-201ENST00000606362 631 ntBASIC14.35□□□□□ -0.11
LRCH1Q9Y2L9 GGTLC5P-201ENST00000617623 998 ntBASIC14.35□□□□□ -0.11
LRCH1Q9Y2L9 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.35□□□□□ -0.11
LRCH1Q9Y2L9 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LRCH1Q9Y2L9 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.35□□□□□ -0.11
LRCH1Q9Y2L9 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
LRCH1Q9Y2L9 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
LRCH1Q9Y2L9 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRCH1Q9Y2L9 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
LRCH1Q9Y2L9 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRCH1Q9Y2L9 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.35□□□□□ -0.11
LRCH1Q9Y2L9 PMS2P7-201ENST00000506558 1336 ntBASIC14.35□□□□□ -0.11
LRCH1Q9Y2L9 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.35□□□□□ -0.11
LRCH1Q9Y2L9 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.35□□□□□ -0.11
LRCH1Q9Y2L9 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
LRCH1Q9Y2L9 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
LRCH1Q9Y2L9 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
LRCH1Q9Y2L9 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms