Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.35□□□□□ -0.27
CLCF1Q9UBD9 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CLCF1Q9UBD9 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CLCF1Q9UBD9 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 AC023090.2-201ENST00000625182 2110 ntBASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 TLE1P1-201ENST00000422965 589 ntBASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 KRT8P13-201ENST00000463294 1010 ntBASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 AC009093.2-202ENST00000620513 2079 ntBASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CLCF1Q9UBD9 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CLCF1Q9UBD9 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.33□□□□□ -0.27
CLCF1Q9UBD9 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
CLCF1Q9UBD9 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CLCF1Q9UBD9 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CLCF1Q9UBD9 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CLCF1Q9UBD9 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CLCF1Q9UBD9 AC138035.3-201ENST00000622706 2791 ntBASIC13.33□□□□□ -0.27
CLCF1Q9UBD9 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 AP001258.2-201ENST00000529891 490 ntBASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 MIR3615-201ENST00000581999 87 ntBASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.33□□□□□ -0.28
CLCF1Q9UBD9 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms