Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.53□□□□□ -0.24
PARPBPQ9NWS1 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
PARPBPQ9NWS1 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.53□□□□□ -0.24
PARPBPQ9NWS1 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
PARPBPQ9NWS1 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
PARPBPQ9NWS1 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
PARPBPQ9NWS1 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.52□□□□□ -0.24
PARPBPQ9NWS1 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
PARPBPQ9NWS1 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
PARPBPQ9NWS1 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
PARPBPQ9NWS1 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.52□□□□□ -0.24
PARPBPQ9NWS1 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
PARPBPQ9NWS1 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
PARPBPQ9NWS1 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
PARPBPQ9NWS1 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
PARPBPQ9NWS1 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
PARPBPQ9NWS1 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PARPBPQ9NWS1 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
PARPBPQ9NWS1 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PARPBPQ9NWS1 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.52□□□□□ -0.25
PARPBPQ9NWS1 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.52□□□□□ -0.25
PARPBPQ9NWS1 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.52□□□□□ -0.25
PARPBPQ9NWS1 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.52□□□□□ -0.25
PARPBPQ9NWS1 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.52□□□□□ -0.25
PARPBPQ9NWS1 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
PARPBPQ9NWS1 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.52□□□□□ -0.25
PARPBPQ9NWS1 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
PARPBPQ9NWS1 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.52□□□□□ -0.25
PARPBPQ9NWS1 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.52□□□□□ -0.25
PARPBPQ9NWS1 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PARPBPQ9NWS1 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
PARPBPQ9NWS1 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
PARPBPQ9NWS1 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
PARPBPQ9NWS1 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.52□□□□□ -0.25
PARPBPQ9NWS1 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.52□□□□□ -0.25
PARPBPQ9NWS1 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.52□□□□□ -0.25
PARPBPQ9NWS1 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
PARPBPQ9NWS1 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.52□□□□□ -0.25
PARPBPQ9NWS1 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.52□□□□□ -0.25
PARPBPQ9NWS1 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
PARPBPQ9NWS1 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PARPBPQ9NWS1 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
PARPBPQ9NWS1 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.52□□□□□ -0.25
PARPBPQ9NWS1 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PARPBPQ9NWS1 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PARPBPQ9NWS1 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
PARPBPQ9NWS1 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.52□□□□□ -0.25
PARPBPQ9NWS1 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
PARPBPQ9NWS1 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
PARPBPQ9NWS1 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
PARPBPQ9NWS1 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.52□□□□□ -0.25
PARPBPQ9NWS1 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PARPBPQ9NWS1 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 RNU1-114P-201ENST00000365297 166 ntBASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 AC106886.1-201ENST00000568660 600 ntBASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 AC008735.3-201ENST00000596646 500 ntBASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.51□□□□□ -0.25
PARPBPQ9NWS1 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms