Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC52A1Q9NWF4 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC52A1Q9NWF4 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SLC52A1Q9NWF4 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC52A1Q9NWF4 KHSRPP1-201ENST00000427983 1768 ntBASIC21.02■□□□□ 0.96
SLC52A1Q9NWF4 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SLC52A1Q9NWF4 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21.02■□□□□ 0.96
SLC52A1Q9NWF4 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC52A1Q9NWF4 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC21.02■□□□□ 0.96
SLC52A1Q9NWF4 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC52A1Q9NWF4 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SLC52A1Q9NWF4 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC52A1Q9NWF4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC52A1Q9NWF4 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC21.02■□□□□ 0.96
SLC52A1Q9NWF4 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC52A1Q9NWF4 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SLC52A1Q9NWF4 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC52A1Q9NWF4 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SLC52A1Q9NWF4 AC018638.5-201ENST00000450885 754 ntBASIC21.02■□□□□ 0.96
SLC52A1Q9NWF4 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
SLC52A1Q9NWF4 RPL18AP8-201ENST00000486071 528 ntBASIC21.02■□□□□ 0.96
SLC52A1Q9NWF4 LINC00634-202ENST00000505157 222 ntBASIC21.02■□□□□ 0.96
SLC52A1Q9NWF4 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SLC52A1Q9NWF4 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC21.02■□□□□ 0.96
SLC52A1Q9NWF4 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC21.02■□□□□ 0.96
SLC52A1Q9NWF4 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC21.02■□□□□ 0.96
SLC52A1Q9NWF4 AP000322.3-201ENST00000608665 388 ntBASIC21.02■□□□□ 0.96
SLC52A1Q9NWF4 AC007250.1-201ENST00000608934 338 ntBASIC21.02■□□□□ 0.96
SLC52A1Q9NWF4 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC52A1Q9NWF4 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC52A1Q9NWF4 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
SLC52A1Q9NWF4 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC21.02■□□□□ 0.96
SLC52A1Q9NWF4 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SLC52A1Q9NWF4 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC21.02■□□□□ 0.96
SLC52A1Q9NWF4 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC52A1Q9NWF4 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SLC52A1Q9NWF4 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC52A1Q9NWF4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.95
SLC52A1Q9NWF4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
SLC52A1Q9NWF4 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
SLC52A1Q9NWF4 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
SLC52A1Q9NWF4 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
SLC52A1Q9NWF4 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SLC52A1Q9NWF4 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC52A1Q9NWF4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC52A1Q9NWF4 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC52A1Q9NWF4 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC52A1Q9NWF4 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC52A1Q9NWF4 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SLC52A1Q9NWF4 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SLC52A1Q9NWF4 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC21.01■□□□□ 0.95
SLC52A1Q9NWF4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC21.01■□□□□ 0.95
SLC52A1Q9NWF4 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC21.01■□□□□ 0.95
SLC52A1Q9NWF4 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC21.01■□□□□ 0.95
SLC52A1Q9NWF4 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC52A1Q9NWF4 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC52A1Q9NWF4 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
SLC52A1Q9NWF4 AC234644.1-201ENST00000406065 370 ntBASIC21.01■□□□□ 0.95
SLC52A1Q9NWF4 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC52A1Q9NWF4 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC21.01■□□□□ 0.95
SLC52A1Q9NWF4 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC21.01■□□□□ 0.95
SLC52A1Q9NWF4 AC073869.2-201ENST00000417338 1026 ntBASIC21.01■□□□□ 0.95
SLC52A1Q9NWF4 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SLC52A1Q9NWF4 AL139008.1-201ENST00000437894 228 ntBASIC21.01■□□□□ 0.95
SLC52A1Q9NWF4 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC21.01■□□□□ 0.95
SLC52A1Q9NWF4 AC010234.1-201ENST00000494599 870 ntBASIC21.01■□□□□ 0.95
SLC52A1Q9NWF4 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC21.01■□□□□ 0.95
SLC52A1Q9NWF4 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC21.01■□□□□ 0.95
SLC52A1Q9NWF4 LINC00431-202ENST00000636375 159 ntBASIC21.01■□□□□ 0.95
SLC52A1Q9NWF4 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC52A1Q9NWF4 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC52A1Q9NWF4 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC52A1Q9NWF4 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC52A1Q9NWF4 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC21.01■□□□□ 0.95
SLC52A1Q9NWF4 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SLC52A1Q9NWF4 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC52A1Q9NWF4 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC21.01■□□□□ 0.95
SLC52A1Q9NWF4 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC52A1Q9NWF4 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC52A1Q9NWF4 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC21■□□□□ 0.95
SLC52A1Q9NWF4 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLC52A1Q9NWF4 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SLC52A1Q9NWF4 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC21■□□□□ 0.95
SLC52A1Q9NWF4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLC52A1Q9NWF4 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC52A1Q9NWF4 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
SLC52A1Q9NWF4 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLC52A1Q9NWF4 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC21■□□□□ 0.95
SLC52A1Q9NWF4 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC21■□□□□ 0.95
SLC52A1Q9NWF4 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC21■□□□□ 0.95
SLC52A1Q9NWF4 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLC52A1Q9NWF4 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC21■□□□□ 0.95
SLC52A1Q9NWF4 MIR645-201ENST00000385283 94 ntBASIC21■□□□□ 0.95
SLC52A1Q9NWF4 PSMD4P1-201ENST00000433951 1109 ntBASIC21■□□□□ 0.95
SLC52A1Q9NWF4 AC092580.1-201ENST00000433998 658 ntBASIC21■□□□□ 0.95
SLC52A1Q9NWF4 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC21■□□□□ 0.95
SLC52A1Q9NWF4 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC21■□□□□ 0.95
SLC52A1Q9NWF4 RN7SL277P-201ENST00000481521 288 ntBASIC21■□□□□ 0.95
SLC52A1Q9NWF4 RPS23-204ENST00000507980 836 ntTSL 2 BASIC21■□□□□ 0.95
SLC52A1Q9NWF4 AC084752.1-201ENST00000509766 622 ntBASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms