Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RTN4Q9NQC3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTN4Q9NQC3 PIWIL1-201ENST00000245255 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTN4Q9NQC3 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 AL645937.6-201ENST00000641122 3727 ntBASIC17.97■□□□□ 0.47
RTN4Q9NQC3 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 CELF3-202ENST00000290585 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 APOBEC3H-204ENST00000442487 988 ntAPPRIS P3 TSL 3 BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.97■□□□□ 0.47
RTN4Q9NQC3 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 AC023024.2-201ENST00000623561 1993 ntBASIC17.97■□□□□ 0.47
RTN4Q9NQC3 VSIG1-201ENST00000217957 2997 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 CICP1-201ENST00000416803 2410 ntBASIC17.97■□□□□ 0.47
RTN4Q9NQC3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
RTN4Q9NQC3 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTN4Q9NQC3 OS9-218ENST00000551035 2246 ntTSL 2 BASIC17.96■□□□□ 0.47
RTN4Q9NQC3 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC17.96■□□□□ 0.47
RTN4Q9NQC3 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC17.96■□□□□ 0.47
RTN4Q9NQC3 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RTN4Q9NQC3 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTN4Q9NQC3 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC17.96■□□□□ 0.47
RTN4Q9NQC3 AL031009.1-201ENST00000624137 2182 ntBASIC17.96■□□□□ 0.47
RTN4Q9NQC3 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC17.96■□□□□ 0.47
RTN4Q9NQC3 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
RTN4Q9NQC3 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTN4Q9NQC3 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RTN4Q9NQC3 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RTN4Q9NQC3 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTN4Q9NQC3 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTN4Q9NQC3 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
RTN4Q9NQC3 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTN4Q9NQC3 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RTN4Q9NQC3 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
RTN4Q9NQC3 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC17.96■□□□□ 0.47
RTN4Q9NQC3 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTN4Q9NQC3 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.96■□□□□ 0.47
RTN4Q9NQC3 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.96■□□□□ 0.47
RTN4Q9NQC3 AC090607.3-201ENST00000559954 388 ntTSL 2 BASIC17.96■□□□□ 0.47
RTN4Q9NQC3 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC17.96■□□□□ 0.47
RTN4Q9NQC3 ACTL9-202ENST00000612068 1252 ntBASIC17.96■□□□□ 0.47
RTN4Q9NQC3 AL118556.2-201ENST00000614375 824 ntBASIC17.96■□□□□ 0.47
RTN4Q9NQC3 LINC01670-203ENST00000624859 977 ntTSL 3 BASIC17.96■□□□□ 0.47
RTN4Q9NQC3 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.96■□□□□ 0.47
RTN4Q9NQC3 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTN4Q9NQC3 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTN4Q9NQC3 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTN4Q9NQC3 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RTN4Q9NQC3 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC17.96■□□□□ 0.47
RTN4Q9NQC3 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RTN4Q9NQC3 UGT1A3-201ENST00000482026 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTN4Q9NQC3 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
RTN4Q9NQC3 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTN4Q9NQC3 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTN4Q9NQC3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RTN4Q9NQC3 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTN4Q9NQC3 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTN4Q9NQC3 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
RTN4Q9NQC3 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RTN4Q9NQC3 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.96■□□□□ 0.47
RTN4Q9NQC3 GPD1-201ENST00000301149 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 SARDH-204ENST00000371872 3344 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RTN4Q9NQC3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms