Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CD248Q9HCU0 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CD248Q9HCU0 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD248Q9HCU0 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.91■□□□□ 0.14
CD248Q9HCU0 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD248Q9HCU0 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.91■□□□□ 0.14
CD248Q9HCU0 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
CD248Q9HCU0 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.91■□□□□ 0.14
CD248Q9HCU0 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD248Q9HCU0 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
CD248Q9HCU0 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.9■□□□□ 0.14
CD248Q9HCU0 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD248Q9HCU0 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CD248Q9HCU0 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD248Q9HCU0 AL139385.1-201ENST00000611744 3272 ntBASIC15.9■□□□□ 0.14
CD248Q9HCU0 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.9■□□□□ 0.14
CD248Q9HCU0 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD248Q9HCU0 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.9■□□□□ 0.14
CD248Q9HCU0 FGD5P1-202ENST00000614866 2498 ntBASIC15.9■□□□□ 0.14
CD248Q9HCU0 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.9■□□□□ 0.14
CD248Q9HCU0 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD248Q9HCU0 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD248Q9HCU0 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.9■□□□□ 0.14
CD248Q9HCU0 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.9■□□□□ 0.14
CD248Q9HCU0 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CD248Q9HCU0 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CD248Q9HCU0 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC15.9■□□□□ 0.14
CD248Q9HCU0 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CD248Q9HCU0 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
CD248Q9HCU0 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD248Q9HCU0 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD248Q9HCU0 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CD248Q9HCU0 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD248Q9HCU0 AC005229.1-201ENST00000392885 409 ntBASIC15.9■□□□□ 0.14
CD248Q9HCU0 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.9■□□□□ 0.14
CD248Q9HCU0 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.9■□□□□ 0.14
CD248Q9HCU0 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CD248Q9HCU0 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.9■□□□□ 0.14
CD248Q9HCU0 TDH-203ENST00000531764 1110 ntBASIC15.9■□□□□ 0.14
CD248Q9HCU0 AL583810.1-201ENST00000553344 1045 ntBASIC15.9■□□□□ 0.14
CD248Q9HCU0 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.9■□□□□ 0.14
CD248Q9HCU0 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CD248Q9HCU0 AC120045.2-201ENST00000567334 178 ntBASIC15.9■□□□□ 0.14
CD248Q9HCU0 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.9■□□□□ 0.14
CD248Q9HCU0 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.9■□□□□ 0.14
CD248Q9HCU0 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD248Q9HCU0 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD248Q9HCU0 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CD248Q9HCU0 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD248Q9HCU0 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD248Q9HCU0 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD248Q9HCU0 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
CD248Q9HCU0 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD248Q9HCU0 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.9■□□□□ 0.14
CD248Q9HCU0 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD248Q9HCU0 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CD248Q9HCU0 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
CD248Q9HCU0 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CD248Q9HCU0 AC118758.2-201ENST00000614242 2813 ntBASIC15.9■□□□□ 0.14
CD248Q9HCU0 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
CD248Q9HCU0 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CD248Q9HCU0 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.14
CD248Q9HCU0 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD248Q9HCU0 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CD248Q9HCU0 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
CD248Q9HCU0 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CD248Q9HCU0 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.89■□□□□ 0.13
CD248Q9HCU0 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.89■□□□□ 0.13
CD248Q9HCU0 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CD248Q9HCU0 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD248Q9HCU0 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CD248Q9HCU0 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.89■□□□□ 0.13
CD248Q9HCU0 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CD248Q9HCU0 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD248Q9HCU0 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD248Q9HCU0 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CD248Q9HCU0 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
CD248Q9HCU0 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD248Q9HCU0 AL607033.1-201ENST00000623900 1599 ntBASIC15.89■□□□□ 0.13
CD248Q9HCU0 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CD248Q9HCU0 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.89■□□□□ 0.13
CD248Q9HCU0 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.89■□□□□ 0.13
CD248Q9HCU0 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CD248Q9HCU0 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD248Q9HCU0 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.89■□□□□ 0.13
CD248Q9HCU0 AC092933.1-201ENST00000393644 945 ntBASIC15.89■□□□□ 0.13
CD248Q9HCU0 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.89■□□□□ 0.13
CD248Q9HCU0 AC099336.1-201ENST00000417053 1171 ntBASIC15.89■□□□□ 0.13
CD248Q9HCU0 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.89■□□□□ 0.13
CD248Q9HCU0 AC134915.1-201ENST00000426461 574 ntBASIC15.89■□□□□ 0.13
CD248Q9HCU0 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CD248Q9HCU0 CTBP2P5-201ENST00000454986 1264 ntBASIC15.89■□□□□ 0.13
CD248Q9HCU0 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.89■□□□□ 0.13
CD248Q9HCU0 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.89■□□□□ 0.13
CD248Q9HCU0 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC15.89■□□□□ 0.13
CD248Q9HCU0 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.89■□□□□ 0.13
CD248Q9HCU0 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.89■□□□□ 0.13
CD248Q9HCU0 AL049840.4-201ENST00000602422 811 ntBASIC15.89■□□□□ 0.13
CD248Q9HCU0 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CD248Q9HCU0 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms