Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 AL360270.3-201ENST00000609118 1348 ntBASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.16■□□□□ 0.02
CCDC68Q9H2F9 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 SLC7A15P-201ENST00000424028 1363 ntBASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 AL353779.1-201ENST00000434793 351 ntBASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 AC004233.3-201ENST00000607794 1269 ntBASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 AC099568.2-201ENST00000609194 695 ntBASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 AC004790.1-201ENST00000612686 536 ntBASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 AJ011932.1-201ENST00000621707 465 ntBASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 TET3-201ENST00000305799 5174 ntTSL 5 BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 INTS4P2-202ENST00000614726 2019 ntBASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
CCDC68Q9H2F9 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 AL158070.2-201ENST00000623713 1621 ntBASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 AC015656.1-201ENST00000624209 3578 ntBASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 DFFBP1-201ENST00000433250 979 ntBASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.14■□□□□ 0.01
CCDC68Q9H2F9 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms