Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 PRRG4-201ENST00000257836 5530 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 AC138969.3-201ENST00000546612 1459 ntBASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 AC138932.2-201ENST00000548268 1459 ntBASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 AC126755.4-201ENST00000549796 1459 ntBASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 AC012508.2-201ENST00000567613 1472 ntBASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
LCE3DQ9BYE3 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC4.09□□□□□ -1.76
LCE3DQ9BYE3 CDY3P-201ENST00000454543 1618 ntBASIC4.09□□□□□ -1.76
LCE3DQ9BYE3 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
LCE3DQ9BYE3 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.76
LCE3DQ9BYE3 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
LCE3DQ9BYE3 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.76
LCE3DQ9BYE3 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
LCE3DQ9BYE3 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
LCE3DQ9BYE3 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
LCE3DQ9BYE3 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
LCE3DQ9BYE3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC4.09□□□□□ -1.76
LCE3DQ9BYE3 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC4.09□□□□□ -1.76
LCE3DQ9BYE3 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
LCE3DQ9BYE3 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC4.09□□□□□ -1.76
LCE3DQ9BYE3 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC4.09□□□□□ -1.76
LCE3DQ9BYE3 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC4.09□□□□□ -1.76
LCE3DQ9BYE3 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
LCE3DQ9BYE3 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.76
LCE3DQ9BYE3 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
LCE3DQ9BYE3 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
LCE3DQ9BYE3 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC4.09□□□□□ -1.76
LCE3DQ9BYE3 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC4.09□□□□□ -1.76
LCE3DQ9BYE3 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC4.09□□□□□ -1.76
LCE3DQ9BYE3 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC4.09□□□□□ -1.76
LCE3DQ9BYE3 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC4.09□□□□□ -1.76
LCE3DQ9BYE3 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC4.09□□□□□ -1.76
LCE3DQ9BYE3 AC023090.2-201ENST00000625182 2110 ntBASIC4.09□□□□□ -1.76
LCE3DQ9BYE3 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
LCE3DQ9BYE3 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
LCE3DQ9BYE3 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
LCE3DQ9BYE3 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
LCE3DQ9BYE3 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
LCE3DQ9BYE3 SF1-209ENST00000433274 2317 ntTSL 2 BASIC4.09□□□□□ -1.76
LCE3DQ9BYE3 AC027612.1-201ENST00000445234 2395 ntBASIC4.09□□□□□ -1.76
LCE3DQ9BYE3 CABIN1-201ENST00000263119 7222 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
LCE3DQ9BYE3 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
LCE3DQ9BYE3 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 SPTY2D1-201ENST00000336349 5754 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 VPS13A-205ENST00000376636 11145 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 VDR-202ENST00000395324 4762 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 ARHGAP12-203ENST00000375245 4958 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 SLC7A1-201ENST00000380752 7347 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 DUSP16-201ENST00000228862 3402 ntTSL 5 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 NBN-201ENST00000265433 4666 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms