Protein–RNA interactions for Protein: Q9BX63

BRIP1, Fanconi anemia group J protein, humanhuman

Predictions only

Length 1,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1Q9BX63 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
BRIP1Q9BX63 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
BRIP1Q9BX63 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
BRIP1Q9BX63 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
BRIP1Q9BX63 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
BRIP1Q9BX63 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
BRIP1Q9BX63 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
BRIP1Q9BX63 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.53
BRIP1Q9BX63 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
BRIP1Q9BX63 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
BRIP1Q9BX63 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
BRIP1Q9BX63 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
BRIP1Q9BX63 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRIP1Q9BX63 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRIP1Q9BX63 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
BRIP1Q9BX63 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC18.33■□□□□ 0.52
BRIP1Q9BX63 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRIP1Q9BX63 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
BRIP1Q9BX63 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC18.33■□□□□ 0.52
BRIP1Q9BX63 FTH1P22-201ENST00000456305 520 ntBASIC18.33■□□□□ 0.52
BRIP1Q9BX63 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
BRIP1Q9BX63 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC18.33■□□□□ 0.52
BRIP1Q9BX63 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC18.33■□□□□ 0.52
BRIP1Q9BX63 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
BRIP1Q9BX63 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
BRIP1Q9BX63 AC007326.1-201ENST00000604539 458 ntBASIC18.33■□□□□ 0.52
BRIP1Q9BX63 AC084781.1-201ENST00000613737 656 ntBASIC18.33■□□□□ 0.52
BRIP1Q9BX63 AC105137.3-201ENST00000617588 984 ntBASIC18.33■□□□□ 0.52
BRIP1Q9BX63 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.33■□□□□ 0.52
BRIP1Q9BX63 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.33■□□□□ 0.52
BRIP1Q9BX63 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
BRIP1Q9BX63 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRIP1Q9BX63 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC18.33■□□□□ 0.52
BRIP1Q9BX63 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
BRIP1Q9BX63 TMBIM7P-202ENST00000641474 1516 ntBASIC18.33■□□□□ 0.52
BRIP1Q9BX63 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
BRIP1Q9BX63 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
BRIP1Q9BX63 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.33■□□□□ 0.52
BRIP1Q9BX63 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
BRIP1Q9BX63 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.32■□□□□ 0.52
BRIP1Q9BX63 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRIP1Q9BX63 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC18.32■□□□□ 0.52
BRIP1Q9BX63 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRIP1Q9BX63 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BRIP1Q9BX63 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC18.32■□□□□ 0.52
BRIP1Q9BX63 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BRIP1Q9BX63 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.32■□□□□ 0.52
BRIP1Q9BX63 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRIP1Q9BX63 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
BRIP1Q9BX63 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRIP1Q9BX63 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRIP1Q9BX63 MIR1227-201ENST00000408484 88 ntBASIC18.32■□□□□ 0.52
BRIP1Q9BX63 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC18.32■□□□□ 0.52
BRIP1Q9BX63 PTPA-215ENST00000432124 567 ntTSL 4 BASIC18.32■□□□□ 0.52
BRIP1Q9BX63 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BRIP1Q9BX63 AP003398.1-201ENST00000531124 318 ntBASIC18.32■□□□□ 0.52
BRIP1Q9BX63 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC18.32■□□□□ 0.52
BRIP1Q9BX63 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
BRIP1Q9BX63 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
BRIP1Q9BX63 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRIP1Q9BX63 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BRIP1Q9BX63 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
BRIP1Q9BX63 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC18.32■□□□□ 0.52
BRIP1Q9BX63 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BRIP1Q9BX63 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
BRIP1Q9BX63 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
BRIP1Q9BX63 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
BRIP1Q9BX63 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
BRIP1Q9BX63 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
BRIP1Q9BX63 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.32■□□□□ 0.52
BRIP1Q9BX63 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
BRIP1Q9BX63 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.31■□□□□ 0.52
BRIP1Q9BX63 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.31■□□□□ 0.52
BRIP1Q9BX63 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.31■□□□□ 0.52
BRIP1Q9BX63 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
BRIP1Q9BX63 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
BRIP1Q9BX63 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRIP1Q9BX63 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.31■□□□□ 0.52
BRIP1Q9BX63 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.31■□□□□ 0.52
BRIP1Q9BX63 AHCYP4-201ENST00000419201 1315 ntBASIC18.31■□□□□ 0.52
BRIP1Q9BX63 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC18.31■□□□□ 0.52
BRIP1Q9BX63 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.31■□□□□ 0.52
BRIP1Q9BX63 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BRIP1Q9BX63 AC007292.2-201ENST00000593524 1812 ntBASIC18.31■□□□□ 0.52
BRIP1Q9BX63 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BRIP1Q9BX63 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
BRIP1Q9BX63 RNA5SP359-201ENST00000364838 113 ntBASIC18.31■□□□□ 0.52
BRIP1Q9BX63 HNRNPA1P27-201ENST00000412087 955 ntBASIC18.31■□□□□ 0.52
BRIP1Q9BX63 HIST2H2BA-201ENST00000412169 381 ntBASIC18.31■□□□□ 0.52
BRIP1Q9BX63 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC18.31■□□□□ 0.52
BRIP1Q9BX63 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
BRIP1Q9BX63 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC18.31■□□□□ 0.52
BRIP1Q9BX63 MRPL22P1-201ENST00000505398 616 ntBASIC18.31■□□□□ 0.52
BRIP1Q9BX63 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
BRIP1Q9BX63 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC18.31■□□□□ 0.52
BRIP1Q9BX63 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC18.31■□□□□ 0.52
BRIP1Q9BX63 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
BRIP1Q9BX63 AC005618.3-201ENST00000624928 458 ntBASIC18.31■□□□□ 0.52
BRIP1Q9BX63 CMC2-224ENST00000630396 481 ntTSL 5 BASIC18.31■□□□□ 0.52
BRIP1Q9BX63 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms