Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 TSEN15P1-201ENST00000423257 515 ntBASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 HLA-K-203ENST00000430151 1046 ntBASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 TPT1P11-201ENST00000458482 498 ntBASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 AC069120.2-201ENST00000524091 540 ntBASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 TIMM17BP1-201ENST00000545713 516 ntBASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 MPI-209ENST00000564003 1195 ntTSL 2 BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 TEX48-202ENST00000612244 662 ntTSL 3 BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HDHD3Q9BSH5 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 CLK3P2-201ENST00000427566 1453 ntBASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 AC087499.5-201ENST00000452760 1342 ntBASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 HNRNPA3P1-201ENST00000401429 1139 ntBASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 AC092580.3-201ENST00000430932 139 ntBASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 KLF2P3-201ENST00000451977 1087 ntBASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 AL589987.1-201ENST00000453380 819 ntBASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 HNRNPA3P5-201ENST00000455201 833 ntBASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 AL158070.2-201ENST00000623713 1621 ntBASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.73□□□□□ -0.37
HDHD3Q9BSH5 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
HDHD3Q9BSH5 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms