Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BBS4Q96RK4 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
BBS4Q96RK4 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BBS4Q96RK4 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BBS4Q96RK4 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
BBS4Q96RK4 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
BBS4Q96RK4 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BBS4Q96RK4 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
BBS4Q96RK4 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
BBS4Q96RK4 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
BBS4Q96RK4 MIR661-201ENST00000384842 89 ntBASIC14.31□□□□□ -0.12
BBS4Q96RK4 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
BBS4Q96RK4 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
BBS4Q96RK4 PIN1P1-201ENST00000412108 996 ntBASIC14.31□□□□□ -0.12
BBS4Q96RK4 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.31□□□□□ -0.12
BBS4Q96RK4 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.31□□□□□ -0.12
BBS4Q96RK4 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.31□□□□□ -0.12
BBS4Q96RK4 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.31□□□□□ -0.12
BBS4Q96RK4 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.31□□□□□ -0.12
BBS4Q96RK4 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.31□□□□□ -0.12
BBS4Q96RK4 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
BBS4Q96RK4 AC124283.3-201ENST00000570869 594 ntBASIC14.31□□□□□ -0.12
BBS4Q96RK4 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
BBS4Q96RK4 AC008494.3-201ENST00000606615 944 ntBASIC14.31□□□□□ -0.12
BBS4Q96RK4 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
BBS4Q96RK4 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.31□□□□□ -0.12
BBS4Q96RK4 AC018529.2-202ENST00000611482 3087 ntBASIC14.31□□□□□ -0.12
BBS4Q96RK4 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BBS4Q96RK4 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.31□□□□□ -0.12
BBS4Q96RK4 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.31□□□□□ -0.12
BBS4Q96RK4 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
BBS4Q96RK4 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BBS4Q96RK4 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
BBS4Q96RK4 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.31□□□□□ -0.12
BBS4Q96RK4 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.31□□□□□ -0.12
BBS4Q96RK4 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BBS4Q96RK4 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BBS4Q96RK4 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
BBS4Q96RK4 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
BBS4Q96RK4 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
BBS4Q96RK4 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BBS4Q96RK4 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
BBS4Q96RK4 FAM45BP-202ENST00000592932 1624 ntBASIC14.3□□□□□ -0.12
BBS4Q96RK4 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
BBS4Q96RK4 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
BBS4Q96RK4 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BBS4Q96RK4 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
BBS4Q96RK4 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BBS4Q96RK4 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BBS4Q96RK4 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
BBS4Q96RK4 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BBS4Q96RK4 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BBS4Q96RK4 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BBS4Q96RK4 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BBS4Q96RK4 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
BBS4Q96RK4 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BBS4Q96RK4 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BBS4Q96RK4 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.3□□□□□ -0.12
BBS4Q96RK4 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.3□□□□□ -0.12
BBS4Q96RK4 AL139094.1-201ENST00000405549 1188 ntBASIC14.3□□□□□ -0.12
BBS4Q96RK4 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.3□□□□□ -0.12
BBS4Q96RK4 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.3□□□□□ -0.12
BBS4Q96RK4 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
BBS4Q96RK4 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
BBS4Q96RK4 API5-211ENST00000534695 560 ntTSL 5 BASIC14.3□□□□□ -0.12
BBS4Q96RK4 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
BBS4Q96RK4 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.3□□□□□ -0.12
BBS4Q96RK4 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.3□□□□□ -0.12
BBS4Q96RK4 PRSS30P-206ENST00000641773 873 ntBASIC14.3□□□□□ -0.12
BBS4Q96RK4 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.3□□□□□ -0.12
BBS4Q96RK4 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BBS4Q96RK4 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
BBS4Q96RK4 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.3□□□□□ -0.12
BBS4Q96RK4 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BBS4Q96RK4 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BBS4Q96RK4 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BBS4Q96RK4 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
BBS4Q96RK4 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.3□□□□□ -0.12
BBS4Q96RK4 AC018442.1-201ENST00000421439 2061 ntBASIC14.3□□□□□ -0.12
BBS4Q96RK4 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
BBS4Q96RK4 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
BBS4Q96RK4 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
BBS4Q96RK4 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
BBS4Q96RK4 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
BBS4Q96RK4 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.3□□□□□ -0.12
BBS4Q96RK4 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BBS4Q96RK4 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.3□□□□□ -0.12
BBS4Q96RK4 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
BBS4Q96RK4 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
BBS4Q96RK4 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
BBS4Q96RK4 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
BBS4Q96RK4 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BBS4Q96RK4 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
BBS4Q96RK4 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BBS4Q96RK4 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BBS4Q96RK4 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
BBS4Q96RK4 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
BBS4Q96RK4 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
BBS4Q96RK4 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
BBS4Q96RK4 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms