Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.21□□□□□ -0.13
NR1H4Q96RI1 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
NR1H4Q96RI1 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.21□□□□□ -0.14
NR1H4Q96RI1 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
NR1H4Q96RI1 RHPN1-AS1-201ENST00000518049 1918 ntBASIC14.21□□□□□ -0.14
NR1H4Q96RI1 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
NR1H4Q96RI1 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC14.21□□□□□ -0.14
NR1H4Q96RI1 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.2□□□□□ -0.14
NR1H4Q96RI1 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 AC021087.4-201ENST00000563761 564 ntBASIC14.2□□□□□ -0.14
NR1H4Q96RI1 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 AC012313.10-201ENST00000623509 926 ntBASIC14.2□□□□□ -0.14
NR1H4Q96RI1 AL805961.1-202ENST00000641562 540 ntBASIC14.2□□□□□ -0.14
NR1H4Q96RI1 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 MIR497HG-202ENST00000572453 3838 ntBASIC14.2□□□□□ -0.14
NR1H4Q96RI1 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NR1H4Q96RI1 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 AP000437.1-201ENST00000624057 2085 ntBASIC14.19□□□□□ -0.14
NR1H4Q96RI1 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.19□□□□□ -0.14
NR1H4Q96RI1 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 POM121L14P-201ENST00000406100 1558 ntBASIC14.19□□□□□ -0.14
NR1H4Q96RI1 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 ELK2BP-201ENST00000415014 1224 ntBASIC14.19□□□□□ -0.14
NR1H4Q96RI1 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 SAPCD2P3-201ENST00000455031 850 ntBASIC14.19□□□□□ -0.14
NR1H4Q96RI1 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.19□□□□□ -0.14
NR1H4Q96RI1 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms