Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 DLG5-201ENST00000372391 7415 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 ANKRD17-202ENST00000358602 10784 ntAPPRIS P4 TSL 5 BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 CRCP-205ENST00000431089 942 ntTSL 2 BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 AC098831.1-202ENST00000438821 336 ntBASIC11.46□□□□□ -0.57
AP1S3Q96PC3 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 AC105233.2-201ENST00000523697 349 ntBASIC11.46□□□□□ -0.57
AP1S3Q96PC3 AF228730.5-201ENST00000530288 346 ntBASIC11.46□□□□□ -0.57
AP1S3Q96PC3 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 PRKN-208ENST00000610470 531 ntTSL 2 BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 PRKN-209ENST00000612485 225 ntTSL 5 BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 INTS4P1-203ENST00000641008 3683 ntBASIC11.46□□□□□ -0.57
AP1S3Q96PC3 PLCXD1-203ENST00000399012 5287 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 ITM2B-202ENST00000378565 10137 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
AP1S3Q96PC3 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
AP1S3Q96PC3 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC11.46□□□□□ -0.58
AP1S3Q96PC3 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
AP1S3Q96PC3 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
AP1S3Q96PC3 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
AP1S3Q96PC3 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
AP1S3Q96PC3 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC11.46□□□□□ -0.58
AP1S3Q96PC3 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
AP1S3Q96PC3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC11.46□□□□□ -0.58
AP1S3Q96PC3 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
AP1S3Q96PC3 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC11.46□□□□□ -0.58
AP1S3Q96PC3 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC11.46□□□□□ -0.58
AP1S3Q96PC3 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
AP1S3Q96PC3 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
AP1S3Q96PC3 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
AP1S3Q96PC3 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC11.46□□□□□ -0.58
AP1S3Q96PC3 SPTBN5-201ENST00000320955 11725 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
AP1S3Q96PC3 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
AP1S3Q96PC3 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC11.46□□□□□ -0.58
AP1S3Q96PC3 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 HERC2P3-204ENST00000426501 5995 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 LAMA5-201ENST00000252999 11426 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 FN1-206ENST00000359671 8524 ntTSL 5 BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 ZBED1P1-201ENST00000502364 1930 ntBASIC11.45□□□□□ -0.58
AP1S3Q96PC3 GOLGA2P9-201ENST00000596977 1937 ntBASIC11.45□□□□□ -0.58
AP1S3Q96PC3 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 MTHFR-203ENST00000376585 8094 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 MEGF8-203ENST00000378073 11034 ntTSL 5 BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
AP1S3Q96PC3 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms