Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 EMC4-208ENST00000559078 599 ntTSL 3 BASIC16.16■□□□□ 0.18
LRCH3Q96II8 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC16.16■□□□□ 0.18
LRCH3Q96II8 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC16.16■□□□□ 0.18
LRCH3Q96II8 AP001184.1-201ENST00000637936 376 ntBASIC16.16■□□□□ 0.18
LRCH3Q96II8 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH3Q96II8 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH3Q96II8 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LRCH3Q96II8 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.16■□□□□ 0.18
LRCH3Q96II8 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH3Q96II8 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
LRCH3Q96II8 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH3Q96II8 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH3Q96II8 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH3Q96II8 AC136759.1-202ENST00000530858 2194 ntBASIC16.16■□□□□ 0.18
LRCH3Q96II8 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH3Q96II8 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRCH3Q96II8 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LRCH3Q96II8 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH3Q96II8 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH3Q96II8 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH3Q96II8 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH3Q96II8 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH3Q96II8 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.15■□□□□ 0.18
LRCH3Q96II8 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH3Q96II8 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LRCH3Q96II8 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH3Q96II8 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
LRCH3Q96II8 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH3Q96II8 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.15■□□□□ 0.18
LRCH3Q96II8 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH3Q96II8 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH3Q96II8 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH3Q96II8 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
LRCH3Q96II8 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH3Q96II8 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.15■□□□□ 0.18
LRCH3Q96II8 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH3Q96II8 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH3Q96II8 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC16.15■□□□□ 0.18
LRCH3Q96II8 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH3Q96II8 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH3Q96II8 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC16.15■□□□□ 0.18
LRCH3Q96II8 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC16.15■□□□□ 0.18
LRCH3Q96II8 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC16.15■□□□□ 0.18
LRCH3Q96II8 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH3Q96II8 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH3Q96II8 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH3Q96II8 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC16.15■□□□□ 0.18
LRCH3Q96II8 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC16.15■□□□□ 0.18
LRCH3Q96II8 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC16.15■□□□□ 0.18
LRCH3Q96II8 AP000911.2-201ENST00000534330 502 ntBASIC16.15■□□□□ 0.18
LRCH3Q96II8 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH3Q96II8 COA4-204ENST00000541455 1038 ntTSL 5 BASIC16.15■□□□□ 0.18
LRCH3Q96II8 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC16.15■□□□□ 0.18
LRCH3Q96II8 AL157813.1-201ENST00000612996 587 ntBASIC16.15■□□□□ 0.18
LRCH3Q96II8 TP53-221ENST00000615910 1149 ntTSL 5 BASIC16.15■□□□□ 0.18
LRCH3Q96II8 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH3Q96II8 ZNF436-AS1-201ENST00000335648 2547 ntBASIC16.15■□□□□ 0.18
LRCH3Q96II8 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH3Q96II8 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LRCH3Q96II8 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH3Q96II8 MGA-212ENST00000619521 1496 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH3Q96II8 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
LRCH3Q96II8 FKBP4P6-201ENST00000457486 1332 ntBASIC16.15■□□□□ 0.18
LRCH3Q96II8 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC16.15■□□□□ 0.18
LRCH3Q96II8 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC16.15■□□□□ 0.18
LRCH3Q96II8 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH3Q96II8 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.15■□□□□ 0.18
LRCH3Q96II8 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH3Q96II8 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH3Q96II8 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH3Q96II8 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRCH3Q96II8 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH3Q96II8 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH3Q96II8 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.14■□□□□ 0.17
LRCH3Q96II8 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
LRCH3Q96II8 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH3Q96II8 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH3Q96II8 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
LRCH3Q96II8 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH3Q96II8 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.14■□□□□ 0.17
LRCH3Q96II8 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH3Q96II8 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH3Q96II8 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH3Q96II8 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH3Q96II8 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH3Q96II8 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH3Q96II8 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH3Q96II8 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH3Q96II8 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.14■□□□□ 0.17
LRCH3Q96II8 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC16.14■□□□□ 0.17
LRCH3Q96II8 FAM58BP-201ENST00000439056 645 ntBASIC16.14■□□□□ 0.17
LRCH3Q96II8 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRCH3Q96II8 RN7SL81P-201ENST00000493781 261 ntBASIC16.14■□□□□ 0.17
LRCH3Q96II8 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.14■□□□□ 0.17
LRCH3Q96II8 AC022616.1-201ENST00000518688 554 ntBASIC16.14■□□□□ 0.17
LRCH3Q96II8 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC16.14■□□□□ 0.17
LRCH3Q96II8 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC16.14■□□□□ 0.17
LRCH3Q96II8 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC16.14■□□□□ 0.17
LRCH3Q96II8 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
LRCH3Q96II8 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms