Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
RNF183Q96D59 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RNF183Q96D59 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
RNF183Q96D59 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
RNF183Q96D59 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RNF183Q96D59 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
RNF183Q96D59 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC11.26□□□□□ -0.61
RNF183Q96D59 AC006486.2-201ENST00000624246 2199 ntBASIC11.26□□□□□ -0.61
RNF183Q96D59 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RNF183Q96D59 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RNF183Q96D59 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RNF183Q96D59 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
RNF183Q96D59 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RNF183Q96D59 LINC01101-201ENST00000622953 1884 ntBASIC11.25□□□□□ -0.61
RNF183Q96D59 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
RNF183Q96D59 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RNF183Q96D59 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
RNF183Q96D59 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RNF183Q96D59 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RNF183Q96D59 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RNF183Q96D59 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
RNF183Q96D59 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RNF183Q96D59 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
RNF183Q96D59 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC11.25□□□□□ -0.61
RNF183Q96D59 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RNF183Q96D59 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RNF183Q96D59 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
RNF183Q96D59 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
RNF183Q96D59 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
RNF183Q96D59 AL138799.1-201ENST00000448213 1675 ntBASIC11.25□□□□□ -0.61
RNF183Q96D59 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RNF183Q96D59 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RNF183Q96D59 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
RNF183Q96D59 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RNF183Q96D59 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC11.25□□□□□ -0.61
RNF183Q96D59 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RNF183Q96D59 MPV17-208ENST00000405076 603 ntTSL 5 BASIC11.25□□□□□ -0.61
RNF183Q96D59 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RNF183Q96D59 CROCCP4-201ENST00000457096 498 ntBASIC11.25□□□□□ -0.61
RNF183Q96D59 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
RNF183Q96D59 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC11.25□□□□□ -0.61
RNF183Q96D59 AP001582.1-201ENST00000525856 295 ntBASIC11.25□□□□□ -0.61
RNF183Q96D59 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC11.25□□□□□ -0.61
RNF183Q96D59 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC11.25□□□□□ -0.61
RNF183Q96D59 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
RNF183Q96D59 COX11-210ENST00000639671 696 ntBASIC11.25□□□□□ -0.61
RNF183Q96D59 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RNF183Q96D59 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RNF183Q96D59 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
RNF183Q96D59 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
RNF183Q96D59 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RNF183Q96D59 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RNF183Q96D59 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RNF183Q96D59 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RNF183Q96D59 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
RNF183Q96D59 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RNF183Q96D59 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC11.25□□□□□ -0.61
RNF183Q96D59 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC11.25□□□□□ -0.61
RNF183Q96D59 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RNF183Q96D59 PPT1-215ENST00000641471 2368 ntBASIC11.25□□□□□ -0.61
RNF183Q96D59 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
RNF183Q96D59 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RNF183Q96D59 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RNF183Q96D59 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC11.25□□□□□ -0.61
RNF183Q96D59 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RNF183Q96D59 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
RNF183Q96D59 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC11.24□□□□□ -0.61
RNF183Q96D59 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RNF183Q96D59 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RNF183Q96D59 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RNF183Q96D59 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RNF183Q96D59 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RNF183Q96D59 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
RNF183Q96D59 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RNF183Q96D59 TP73-213ENST00000604479 1623 ntTSL 5 BASIC11.24□□□□□ -0.61
RNF183Q96D59 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
RNF183Q96D59 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC11.24□□□□□ -0.61
RNF183Q96D59 AC010491.1-201ENST00000563101 2797 ntBASIC11.24□□□□□ -0.61
RNF183Q96D59 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
RNF183Q96D59 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RNF183Q96D59 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RNF183Q96D59 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC11.24□□□□□ -0.61
RNF183Q96D59 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RNF183Q96D59 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RNF183Q96D59 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RNF183Q96D59 USE1-206ENST00000595101 1776 ntTSL 2 BASIC11.24□□□□□ -0.61
RNF183Q96D59 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RNF183Q96D59 SUPT20HL2-201ENST00000486479 2409 ntBASIC11.24□□□□□ -0.61
RNF183Q96D59 DGCR9-201ENST00000609630 2415 ntBASIC11.24□□□□□ -0.61
RNF183Q96D59 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RNF183Q96D59 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC11.24□□□□□ -0.61
RNF183Q96D59 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RNF183Q96D59 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC11.24□□□□□ -0.61
RNF183Q96D59 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC11.24□□□□□ -0.61
RNF183Q96D59 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RNF183Q96D59 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RNF183Q96D59 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RNF183Q96D59 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RNF183Q96D59 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC11.24□□□□□ -0.61
RNF183Q96D59 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms