Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AC108725.1-201ENST00000495472 409 ntBASIC14.26□□□□□ -0.13
TM9SF4Q92544 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
TM9SF4Q92544 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
TM9SF4Q92544 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TM9SF4Q92544 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.26□□□□□ -0.13
TM9SF4Q92544 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.26□□□□□ -0.13
TM9SF4Q92544 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.26□□□□□ -0.13
TM9SF4Q92544 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.26□□□□□ -0.13
TM9SF4Q92544 AC138951.2-201ENST00000623455 1161 ntBASIC14.26□□□□□ -0.13
TM9SF4Q92544 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.26□□□□□ -0.13
TM9SF4Q92544 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.26□□□□□ -0.13
TM9SF4Q92544 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TM9SF4Q92544 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TM9SF4Q92544 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TM9SF4Q92544 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TM9SF4Q92544 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TM9SF4Q92544 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TM9SF4Q92544 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
TM9SF4Q92544 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.26□□□□□ -0.13
TM9SF4Q92544 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.26□□□□□ -0.13
TM9SF4Q92544 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TM9SF4Q92544 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TM9SF4Q92544 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TM9SF4Q92544 MSTO2P-201ENST00000314835 1709 ntBASIC14.26□□□□□ -0.13
TM9SF4Q92544 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TM9SF4Q92544 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.26□□□□□ -0.13
TM9SF4Q92544 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
TM9SF4Q92544 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TM9SF4Q92544 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TM9SF4Q92544 FGD5P1-202ENST00000614866 2498 ntBASIC14.25□□□□□ -0.13
TM9SF4Q92544 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.25□□□□□ -0.13
TM9SF4Q92544 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF4Q92544 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF4Q92544 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF4Q92544 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF4Q92544 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TM9SF4Q92544 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TM9SF4Q92544 AHCYP2-201ENST00000430630 1300 ntBASIC14.25□□□□□ -0.13
TM9SF4Q92544 KRT8P35-201ENST00000483942 1338 ntBASIC14.25□□□□□ -0.13
TM9SF4Q92544 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF4Q92544 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF4Q92544 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF4Q92544 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF4Q92544 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF4Q92544 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF4Q92544 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF4Q92544 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.25□□□□□ -0.13
TM9SF4Q92544 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.25□□□□□ -0.13
TM9SF4Q92544 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.25□□□□□ -0.13
TM9SF4Q92544 NUS1P3-201ENST00000423502 862 ntBASIC14.25□□□□□ -0.13
TM9SF4Q92544 Z93015.1-201ENST00000451718 390 ntBASIC14.25□□□□□ -0.13
TM9SF4Q92544 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF4Q92544 AC099548.2-209ENST00000480264 625 ntBASIC14.25□□□□□ -0.13
TM9SF4Q92544 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.25□□□□□ -0.13
TM9SF4Q92544 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
TM9SF4Q92544 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC14.25□□□□□ -0.13
TM9SF4Q92544 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF4Q92544 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.25□□□□□ -0.13
TM9SF4Q92544 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.25□□□□□ -0.13
TM9SF4Q92544 AC009542.2-202ENST00000619004 1067 ntBASIC14.25□□□□□ -0.13
TM9SF4Q92544 AC132938.4-201ENST00000623835 848 ntBASIC14.25□□□□□ -0.13
TM9SF4Q92544 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.25□□□□□ -0.13
TM9SF4Q92544 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TM9SF4Q92544 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF4Q92544 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.25□□□□□ -0.13
TM9SF4Q92544 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF4Q92544 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF4Q92544 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.25□□□□□ -0.13
TM9SF4Q92544 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF4Q92544 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF4Q92544 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF4Q92544 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF4Q92544 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF4Q92544 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF4Q92544 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF4Q92544 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF4Q92544 AC126365.1-201ENST00000578585 1514 ntBASIC14.25□□□□□ -0.13
TM9SF4Q92544 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF4Q92544 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.25□□□□□ -0.13
TM9SF4Q92544 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF4Q92544 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
TM9SF4Q92544 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.25□□□□□ -0.13
TM9SF4Q92544 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.25□□□□□ -0.13
TM9SF4Q92544 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF4Q92544 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TM9SF4Q92544 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TM9SF4Q92544 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TM9SF4Q92544 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TM9SF4Q92544 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TM9SF4Q92544 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TM9SF4Q92544 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.24□□□□□ -0.13
TM9SF4Q92544 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.24□□□□□ -0.13
TM9SF4Q92544 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TM9SF4Q92544 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TM9SF4Q92544 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TM9SF4Q92544 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.24□□□□□ -0.13
TM9SF4Q92544 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TM9SF4Q92544 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.24□□□□□ -0.13
TM9SF4Q92544 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TM9SF4Q92544 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms