Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 SUN1-204ENST00000403868 978 ntTSL 2 BASIC22.49■■□□□ 1.19
CCER1Q8TC90 AC241585.1-201ENST00000433527 519 ntBASIC22.49■■□□□ 1.19
CCER1Q8TC90 AL353779.1-201ENST00000434793 351 ntBASIC22.49■■□□□ 1.19
CCER1Q8TC90 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC22.49■■□□□ 1.19
CCER1Q8TC90 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC22.49■■□□□ 1.19
CCER1Q8TC90 DUX4L27-201ENST00000554796 1261 ntBASIC22.49■■□□□ 1.19
CCER1Q8TC90 SRD5A3P1-201ENST00000603021 949 ntBASIC22.49■■□□□ 1.19
CCER1Q8TC90 AC008738.7-201ENST00000609744 511 ntBASIC22.49■■□□□ 1.19
CCER1Q8TC90 AC004840.1-201ENST00000636359 365 ntBASIC22.49■■□□□ 1.19
CCER1Q8TC90 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC22.49■■□□□ 1.19
CCER1Q8TC90 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CCER1Q8TC90 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC22.49■■□□□ 1.19
CCER1Q8TC90 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCER1Q8TC90 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCER1Q8TC90 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
CCER1Q8TC90 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCER1Q8TC90 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CCER1Q8TC90 AL138799.1-201ENST00000448213 1675 ntBASIC22.49■■□□□ 1.19
CCER1Q8TC90 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CCER1Q8TC90 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCER1Q8TC90 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC22.48■■□□□ 1.19
CCER1Q8TC90 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC22.48■■□□□ 1.19
CCER1Q8TC90 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
CCER1Q8TC90 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCER1Q8TC90 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCER1Q8TC90 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCER1Q8TC90 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CCER1Q8TC90 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC22.48■■□□□ 1.19
CCER1Q8TC90 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
CCER1Q8TC90 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCER1Q8TC90 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCER1Q8TC90 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CCER1Q8TC90 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CCER1Q8TC90 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC22.48■■□□□ 1.19
CCER1Q8TC90 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCER1Q8TC90 MIR1233-2-201ENST00000408138 82 ntBASIC22.48■■□□□ 1.19
CCER1Q8TC90 MIR1233-1-201ENST00000408722 82 ntBASIC22.48■■□□□ 1.19
CCER1Q8TC90 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC22.48■■□□□ 1.19
CCER1Q8TC90 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC22.48■■□□□ 1.19
CCER1Q8TC90 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC22.48■■□□□ 1.19
CCER1Q8TC90 TPT1P11-201ENST00000458482 498 ntBASIC22.48■■□□□ 1.19
CCER1Q8TC90 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC22.48■■□□□ 1.19
CCER1Q8TC90 AC067863.1-201ENST00000494933 530 ntBASIC22.48■■□□□ 1.19
CCER1Q8TC90 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CCER1Q8TC90 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC22.48■■□□□ 1.19
CCER1Q8TC90 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC22.48■■□□□ 1.19
CCER1Q8TC90 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC22.48■■□□□ 1.19
CCER1Q8TC90 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC22.48■■□□□ 1.19
CCER1Q8TC90 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
CCER1Q8TC90 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCER1Q8TC90 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCER1Q8TC90 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCER1Q8TC90 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCER1Q8TC90 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
CCER1Q8TC90 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCER1Q8TC90 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCER1Q8TC90 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCER1Q8TC90 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
CCER1Q8TC90 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
CCER1Q8TC90 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC22.48■■□□□ 1.19
CCER1Q8TC90 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCER1Q8TC90 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CCER1Q8TC90 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
CCER1Q8TC90 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CCER1Q8TC90 AC092135.3-201ENST00000624151 1846 ntBASIC22.47■■□□□ 1.19
CCER1Q8TC90 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CCER1Q8TC90 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC22.47■■□□□ 1.19
CCER1Q8TC90 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CCER1Q8TC90 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
CCER1Q8TC90 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
CCER1Q8TC90 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CCER1Q8TC90 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CCER1Q8TC90 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CCER1Q8TC90 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
CCER1Q8TC90 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CCER1Q8TC90 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CCER1Q8TC90 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC22.47■■□□□ 1.19
CCER1Q8TC90 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC22.47■■□□□ 1.19
CCER1Q8TC90 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CCER1Q8TC90 AC022447.6-201ENST00000515522 438 ntBASIC22.47■■□□□ 1.19
CCER1Q8TC90 FTH1-202ENST00000526640 786 ntTSL 2 BASIC22.47■■□□□ 1.19
CCER1Q8TC90 AC135586.1-201ENST00000539323 574 ntBASIC22.47■■□□□ 1.19
CCER1Q8TC90 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC22.47■■□□□ 1.19
CCER1Q8TC90 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
CCER1Q8TC90 AC079781.4-201ENST00000641908 219 ntBASIC22.47■■□□□ 1.19
CCER1Q8TC90 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CCER1Q8TC90 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
CCER1Q8TC90 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CCER1Q8TC90 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CCER1Q8TC90 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
CCER1Q8TC90 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC22.47■■□□□ 1.19
CCER1Q8TC90 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CCER1Q8TC90 BTBD7P1-201ENST00000447253 1453 ntBASIC22.47■■□□□ 1.19
CCER1Q8TC90 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
CCER1Q8TC90 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
CCER1Q8TC90 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCER1Q8TC90 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC22.46■■□□□ 1.19
CCER1Q8TC90 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCER1Q8TC90 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
CCER1Q8TC90 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms