Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
BEST2Q8NFU1 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BEST2Q8NFU1 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BEST2Q8NFU1 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
BEST2Q8NFU1 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
BEST2Q8NFU1 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BEST2Q8NFU1 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.12■□□□□ 0.17
BEST2Q8NFU1 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.12■□□□□ 0.17
BEST2Q8NFU1 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BEST2Q8NFU1 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.12■□□□□ 0.17
BEST2Q8NFU1 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.12■□□□□ 0.17
BEST2Q8NFU1 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.12■□□□□ 0.17
BEST2Q8NFU1 MIR4683-201ENST00000579659 81 ntBASIC16.12■□□□□ 0.17
BEST2Q8NFU1 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.12■□□□□ 0.17
BEST2Q8NFU1 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
BEST2Q8NFU1 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BEST2Q8NFU1 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BEST2Q8NFU1 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BEST2Q8NFU1 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
BEST2Q8NFU1 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BEST2Q8NFU1 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BEST2Q8NFU1 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BEST2Q8NFU1 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BEST2Q8NFU1 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BEST2Q8NFU1 MYO15B-237ENST00000642007 4893 ntBASIC16.12■□□□□ 0.17
BEST2Q8NFU1 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
BEST2Q8NFU1 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
BEST2Q8NFU1 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
BEST2Q8NFU1 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
BEST2Q8NFU1 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
BEST2Q8NFU1 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.11■□□□□ 0.17
BEST2Q8NFU1 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
BEST2Q8NFU1 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
BEST2Q8NFU1 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BEST2Q8NFU1 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
BEST2Q8NFU1 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BEST2Q8NFU1 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BEST2Q8NFU1 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BEST2Q8NFU1 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BEST2Q8NFU1 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
BEST2Q8NFU1 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.11■□□□□ 0.17
BEST2Q8NFU1 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC16.11■□□□□ 0.17
BEST2Q8NFU1 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.11■□□□□ 0.17
BEST2Q8NFU1 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
BEST2Q8NFU1 RPSAP36-202ENST00000494591 1261 ntBASIC16.11■□□□□ 0.17
BEST2Q8NFU1 ZNF767P-206ENST00000513792 565 ntBASIC16.11■□□□□ 0.17
BEST2Q8NFU1 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.11■□□□□ 0.17
BEST2Q8NFU1 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.11■□□□□ 0.17
BEST2Q8NFU1 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
BEST2Q8NFU1 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.11■□□□□ 0.17
BEST2Q8NFU1 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.11■□□□□ 0.17
BEST2Q8NFU1 GPR182-203ENST00000622922 591 ntBASIC16.11■□□□□ 0.17
BEST2Q8NFU1 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BEST2Q8NFU1 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.11■□□□□ 0.17
BEST2Q8NFU1 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
BEST2Q8NFU1 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
BEST2Q8NFU1 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BEST2Q8NFU1 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
BEST2Q8NFU1 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
BEST2Q8NFU1 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
BEST2Q8NFU1 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
BEST2Q8NFU1 AC009093.2-202ENST00000620513 2079 ntBASIC16.1■□□□□ 0.17
BEST2Q8NFU1 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
BEST2Q8NFU1 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BEST2Q8NFU1 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
BEST2Q8NFU1 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
BEST2Q8NFU1 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BEST2Q8NFU1 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
BEST2Q8NFU1 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BEST2Q8NFU1 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.1■□□□□ 0.17
BEST2Q8NFU1 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
BEST2Q8NFU1 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
BEST2Q8NFU1 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.1■□□□□ 0.17
BEST2Q8NFU1 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
BEST2Q8NFU1 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.1■□□□□ 0.17
BEST2Q8NFU1 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.1■□□□□ 0.17
BEST2Q8NFU1 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.1■□□□□ 0.17
BEST2Q8NFU1 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BEST2Q8NFU1 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
BEST2Q8NFU1 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.1■□□□□ 0.17
BEST2Q8NFU1 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
BEST2Q8NFU1 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.1■□□□□ 0.17
BEST2Q8NFU1 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.1■□□□□ 0.17
BEST2Q8NFU1 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.1■□□□□ 0.17
BEST2Q8NFU1 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.1■□□□□ 0.17
BEST2Q8NFU1 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
BEST2Q8NFU1 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.1■□□□□ 0.17
BEST2Q8NFU1 AP001002.3-201ENST00000623482 206 ntBASIC16.1■□□□□ 0.17
BEST2Q8NFU1 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BEST2Q8NFU1 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
BEST2Q8NFU1 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
BEST2Q8NFU1 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
BEST2Q8NFU1 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BEST2Q8NFU1 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
BEST2Q8NFU1 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
BEST2Q8NFU1 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
BEST2Q8NFU1 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BEST2Q8NFU1 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
BEST2Q8NFU1 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
BEST2Q8NFU1 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms