Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.33■□□□□ 0.04
KDM1BQ8NB78 AC026434.2-201ENST00000506094 1078 ntBASIC15.33■□□□□ 0.04
KDM1BQ8NB78 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC15.33■□□□□ 0.04
KDM1BQ8NB78 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.33■□□□□ 0.04
KDM1BQ8NB78 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KDM1BQ8NB78 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.33■□□□□ 0.04
KDM1BQ8NB78 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KDM1BQ8NB78 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.33■□□□□ 0.04
KDM1BQ8NB78 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.33■□□□□ 0.04
KDM1BQ8NB78 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KDM1BQ8NB78 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.33■□□□□ 0.04
KDM1BQ8NB78 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KDM1BQ8NB78 CLUHP2-201ENST00000426660 1303 ntBASIC15.33■□□□□ 0.04
KDM1BQ8NB78 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.33■□□□□ 0.04
KDM1BQ8NB78 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.33■□□□□ 0.04
KDM1BQ8NB78 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.33■□□□□ 0.04
KDM1BQ8NB78 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.33■□□□□ 0.04
KDM1BQ8NB78 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.33■□□□□ 0.04
KDM1BQ8NB78 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KDM1BQ8NB78 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.33■□□□□ 0.04
KDM1BQ8NB78 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KDM1BQ8NB78 AP000593.2-201ENST00000542775 1433 ntBASIC15.33■□□□□ 0.04
KDM1BQ8NB78 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KDM1BQ8NB78 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.33■□□□□ 0.04
KDM1BQ8NB78 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
KDM1BQ8NB78 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
KDM1BQ8NB78 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.33■□□□□ 0.04
KDM1BQ8NB78 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KDM1BQ8NB78 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
KDM1BQ8NB78 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.33■□□□□ 0.04
KDM1BQ8NB78 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
KDM1BQ8NB78 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
KDM1BQ8NB78 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
KDM1BQ8NB78 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
KDM1BQ8NB78 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 AL136309.1-201ENST00000403917 691 ntBASIC15.32■□□□□ 0.04
KDM1BQ8NB78 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 RPSAP36-202ENST00000494591 1261 ntBASIC15.32■□□□□ 0.04
KDM1BQ8NB78 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 MIR4741-201ENST00000579822 90 ntBASIC15.32■□□□□ 0.04
KDM1BQ8NB78 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 OR10B1P-201ENST00000601666 907 ntBASIC15.32■□□□□ 0.04
KDM1BQ8NB78 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
KDM1BQ8NB78 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
KDM1BQ8NB78 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
KDM1BQ8NB78 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.31■□□□□ 0.04
KDM1BQ8NB78 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KDM1BQ8NB78 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
KDM1BQ8NB78 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
KDM1BQ8NB78 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
KDM1BQ8NB78 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KDM1BQ8NB78 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KDM1BQ8NB78 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.31■□□□□ 0.04
KDM1BQ8NB78 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
KDM1BQ8NB78 AC007686.3-201ENST00000619017 3487 ntBASIC15.31■□□□□ 0.04
KDM1BQ8NB78 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
KDM1BQ8NB78 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
KDM1BQ8NB78 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
KDM1BQ8NB78 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms