Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 KLF2P2-201ENST00000416807 1039 ntBASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 GIMAP3P-201ENST00000495150 836 ntBASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 AC190387.1-201ENST00000551683 408 ntBASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 COQ6-210ENST00000554920 649 ntTSL 3 BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 CTBP2P3-201ENST00000585629 1255 ntBASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 METTL26-214ENST00000614890 801 ntTSL 3 BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC11.93□□□□□ -0.5
TTC9CQ8N5M4 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 RER1-203ENST00000378513 3000 ntTSL 3 BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 USP31-203ENST00000567975 2142 ntTSL 2 BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 RNU1-114P-201ENST00000365297 166 ntBASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 PGGT1BP2-201ENST00000398621 1028 ntBASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 WDR53-203ENST00000429115 683 ntTSL 2 BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 KRT18P25-201ENST00000508931 1278 ntBASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 KSR1-207ENST00000578981 748 ntTSL 4 BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 WFDC1-204ENST00000613603 549 ntBASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 CU634019.7-201ENST00000624153 1185 ntBASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 AC005252.2-201ENST00000624630 1141 ntBASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 FP236241.2-201ENST00000624906 1185 ntBASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 AL033527.5-201ENST00000641382 801 ntBASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 AMT-204ENST00000427987 1646 ntTSL 5 BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
TTC9CQ8N5M4 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms