Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
XRN1Q8IZH2 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
XRN1Q8IZH2 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
XRN1Q8IZH2 AL109809.1-201ENST00000418979 1367 ntBASIC20.13■□□□□ 0.81
XRN1Q8IZH2 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
XRN1Q8IZH2 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
XRN1Q8IZH2 PCDHA1-201ENST00000378133 2726 ntBASIC20.13■□□□□ 0.81
XRN1Q8IZH2 CICP23-201ENST00000605013 2741 ntBASIC20.13■□□□□ 0.81
XRN1Q8IZH2 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
XRN1Q8IZH2 MIR566-201ENST00000385187 94 ntBASIC20.13■□□□□ 0.81
XRN1Q8IZH2 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
XRN1Q8IZH2 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
XRN1Q8IZH2 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC20.13■□□□□ 0.81
XRN1Q8IZH2 RN7SL582P-201ENST00000491078 279 ntBASIC20.13■□□□□ 0.81
XRN1Q8IZH2 ALG1L3P-201ENST00000503331 765 ntBASIC20.13■□□□□ 0.81
XRN1Q8IZH2 F11R-204ENST00000537746 1245 ntTSL 2 BASIC20.13■□□□□ 0.81
XRN1Q8IZH2 FOXN3-AS2-201ENST00000554071 1262 ntBASIC20.13■□□□□ 0.81
XRN1Q8IZH2 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC20.13■□□□□ 0.81
XRN1Q8IZH2 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC20.13■□□□□ 0.81
XRN1Q8IZH2 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
XRN1Q8IZH2 AC006548.2-201ENST00000605217 529 ntBASIC20.13■□□□□ 0.81
XRN1Q8IZH2 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
XRN1Q8IZH2 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
XRN1Q8IZH2 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
XRN1Q8IZH2 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
XRN1Q8IZH2 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
XRN1Q8IZH2 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
XRN1Q8IZH2 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
XRN1Q8IZH2 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
XRN1Q8IZH2 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC20.12■□□□□ 0.81
XRN1Q8IZH2 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
XRN1Q8IZH2 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
XRN1Q8IZH2 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
XRN1Q8IZH2 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC20.12■□□□□ 0.81
XRN1Q8IZH2 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
XRN1Q8IZH2 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
XRN1Q8IZH2 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC20.12■□□□□ 0.81
XRN1Q8IZH2 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC20.12■□□□□ 0.81
XRN1Q8IZH2 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
XRN1Q8IZH2 AL627230.2-201ENST00000613254 655 ntBASIC20.12■□□□□ 0.81
XRN1Q8IZH2 PLS3-210ENST00000626746 216 ntTSL 4 BASIC20.12■□□□□ 0.81
XRN1Q8IZH2 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC20.12■□□□□ 0.81
XRN1Q8IZH2 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC20.12■□□□□ 0.81
XRN1Q8IZH2 ACE3P-201ENST00000423435 1973 ntBASIC20.12■□□□□ 0.81
XRN1Q8IZH2 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
XRN1Q8IZH2 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
XRN1Q8IZH2 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
XRN1Q8IZH2 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
XRN1Q8IZH2 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
XRN1Q8IZH2 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
XRN1Q8IZH2 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
XRN1Q8IZH2 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
XRN1Q8IZH2 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
XRN1Q8IZH2 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
XRN1Q8IZH2 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC20.11■□□□□ 0.81
XRN1Q8IZH2 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
XRN1Q8IZH2 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC20.11■□□□□ 0.81
XRN1Q8IZH2 AC083801.1-201ENST00000491689 358 ntBASIC20.11■□□□□ 0.81
XRN1Q8IZH2 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
XRN1Q8IZH2 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC20.11■□□□□ 0.81
XRN1Q8IZH2 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC20.11■□□□□ 0.81
XRN1Q8IZH2 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC20.11■□□□□ 0.81
XRN1Q8IZH2 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC20.11■□□□□ 0.81
XRN1Q8IZH2 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC20.11■□□□□ 0.81
XRN1Q8IZH2 AC148477.9-201ENST00000623974 539 ntBASIC20.11■□□□□ 0.81
XRN1Q8IZH2 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC20.11■□□□□ 0.81
XRN1Q8IZH2 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
XRN1Q8IZH2 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
XRN1Q8IZH2 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC20.11■□□□□ 0.81
XRN1Q8IZH2 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
XRN1Q8IZH2 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC20.11■□□□□ 0.81
XRN1Q8IZH2 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
XRN1Q8IZH2 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
XRN1Q8IZH2 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
XRN1Q8IZH2 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC20.11■□□□□ 0.81
XRN1Q8IZH2 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
XRN1Q8IZH2 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC20.1■□□□□ 0.81
XRN1Q8IZH2 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC20.1■□□□□ 0.81
XRN1Q8IZH2 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC20.1■□□□□ 0.81
XRN1Q8IZH2 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC20.1■□□□□ 0.81
XRN1Q8IZH2 MME-218ENST00000625667 363 ntTSL 5 BASIC20.1■□□□□ 0.81
XRN1Q8IZH2 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC20.1■□□□□ 0.81
XRN1Q8IZH2 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
XRN1Q8IZH2 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
XRN1Q8IZH2 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
XRN1Q8IZH2 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
XRN1Q8IZH2 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
XRN1Q8IZH2 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
XRN1Q8IZH2 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
XRN1Q8IZH2 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC20.1■□□□□ 0.81
XRN1Q8IZH2 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
XRN1Q8IZH2 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
XRN1Q8IZH2 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC20.1■□□□□ 0.81
XRN1Q8IZH2 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
XRN1Q8IZH2 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
XRN1Q8IZH2 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
XRN1Q8IZH2 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
XRN1Q8IZH2 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC20.1■□□□□ 0.81
XRN1Q8IZH2 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
XRN1Q8IZH2 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms