Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 PHKG1P2-201ENST00000457537 863 ntBASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 IRF8-202ENST00000562492 946 ntTSL 3 BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 AC021087.4-201ENST00000563761 564 ntBASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 OR7E47P-204ENST00000575924 449 ntBASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 AL732292.2-201ENST00000609649 430 ntBASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.67□□□□□ -0.22
CROCCP3Q8IVE0 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 LSM5-204ENST00000409909 740 ntTSL 2 BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 AC093827.2-201ENST00000512654 315 ntBASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CROCCP3Q8IVE0 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CROCCP3Q8IVE0 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms