Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 TMBIM7P-203ENST00000641617 1718 ntBASIC15.92■□□□□ 0.14
NPAS4Q8IUM7 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
NPAS4Q8IUM7 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NPAS4Q8IUM7 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NPAS4Q8IUM7 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPAS4Q8IUM7 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
NPAS4Q8IUM7 RPSAP31-201ENST00000416648 895 ntBASIC15.92■□□□□ 0.14
NPAS4Q8IUM7 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC15.92■□□□□ 0.14
NPAS4Q8IUM7 XBP1P1-201ENST00000436573 652 ntBASIC15.92■□□□□ 0.14
NPAS4Q8IUM7 AC078991.1-201ENST00000437297 610 ntBASIC15.92■□□□□ 0.14
NPAS4Q8IUM7 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC15.92■□□□□ 0.14
NPAS4Q8IUM7 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPAS4Q8IUM7 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC15.92■□□□□ 0.14
NPAS4Q8IUM7 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC15.92■□□□□ 0.14
NPAS4Q8IUM7 TPM1-223ENST00000560445 485 ntTSL 3 BASIC15.92■□□□□ 0.14
NPAS4Q8IUM7 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC15.92■□□□□ 0.14
NPAS4Q8IUM7 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC15.92■□□□□ 0.14
NPAS4Q8IUM7 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC15.92■□□□□ 0.14
NPAS4Q8IUM7 MIR3677-201ENST00000578964 60 ntBASIC15.92■□□□□ 0.14
NPAS4Q8IUM7 MIR3188-201ENST00000583494 85 ntBASIC15.92■□□□□ 0.14
NPAS4Q8IUM7 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC15.92■□□□□ 0.14
NPAS4Q8IUM7 AC092171.5-201ENST00000608012 942 ntBASIC15.92■□□□□ 0.14
NPAS4Q8IUM7 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC15.92■□□□□ 0.14
NPAS4Q8IUM7 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
NPAS4Q8IUM7 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NPAS4Q8IUM7 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPAS4Q8IUM7 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPAS4Q8IUM7 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPAS4Q8IUM7 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NPAS4Q8IUM7 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.92■□□□□ 0.14
NPAS4Q8IUM7 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
NPAS4Q8IUM7 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPAS4Q8IUM7 AC074138.1-201ENST00000611182 1303 ntBASIC15.92■□□□□ 0.14
NPAS4Q8IUM7 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPAS4Q8IUM7 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NPAS4Q8IUM7 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
NPAS4Q8IUM7 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
NPAS4Q8IUM7 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 PHBP15-201ENST00000574228 665 ntBASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 HPN-206ENST00000597419 1212 ntTSL 5 BASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 DDX5-235ENST00000630471 473 ntTSL 4 BASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC15.91■□□□□ 0.14
NPAS4Q8IUM7 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
NPAS4Q8IUM7 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS4Q8IUM7 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
NPAS4Q8IUM7 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS4Q8IUM7 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.9■□□□□ 0.14
NPAS4Q8IUM7 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS4Q8IUM7 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.9■□□□□ 0.14
NPAS4Q8IUM7 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS4Q8IUM7 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
NPAS4Q8IUM7 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS4Q8IUM7 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS4Q8IUM7 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS4Q8IUM7 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS4Q8IUM7 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.9■□□□□ 0.14
NPAS4Q8IUM7 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NPAS4Q8IUM7 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms