Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 REXO1L4P-201ENST00000605109 1937 ntBASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 AL109954.1-202ENST00000564051 2148 ntBASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
OTOP1Q7RTM1 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
OTOP1Q7RTM1 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
OTOP1Q7RTM1 CELP-203ENST00000624767 2414 ntTSL 5 BASIC17.22■□□□□ 0.35
OTOP1Q7RTM1 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
OTOP1Q7RTM1 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
OTOP1Q7RTM1 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
OTOP1Q7RTM1 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
OTOP1Q7RTM1 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
OTOP1Q7RTM1 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
OTOP1Q7RTM1 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
OTOP1Q7RTM1 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.22■□□□□ 0.35
OTOP1Q7RTM1 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
OTOP1Q7RTM1 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
OTOP1Q7RTM1 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC17.22■□□□□ 0.35
OTOP1Q7RTM1 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
OTOP1Q7RTM1 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC17.22■□□□□ 0.35
OTOP1Q7RTM1 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC17.22■□□□□ 0.35
OTOP1Q7RTM1 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC17.22■□□□□ 0.35
OTOP1Q7RTM1 AC018463.1-201ENST00000456674 917 ntBASIC17.22■□□□□ 0.35
OTOP1Q7RTM1 AC130709.1-201ENST00000484779 1212 ntBASIC17.22■□□□□ 0.35
OTOP1Q7RTM1 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
OTOP1Q7RTM1 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC17.22■□□□□ 0.35
OTOP1Q7RTM1 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.22■□□□□ 0.35
OTOP1Q7RTM1 FO393412.1-201ENST00000619841 382 ntBASIC17.22■□□□□ 0.35
OTOP1Q7RTM1 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
OTOP1Q7RTM1 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.22■□□□□ 0.35
OTOP1Q7RTM1 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
OTOP1Q7RTM1 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.22■□□□□ 0.35
OTOP1Q7RTM1 AL359258.3-201ENST00000622910 2331 ntBASIC17.22■□□□□ 0.35
OTOP1Q7RTM1 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
OTOP1Q7RTM1 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.22■□□□□ 0.35
OTOP1Q7RTM1 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.22■□□□□ 0.35
OTOP1Q7RTM1 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
OTOP1Q7RTM1 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.22■□□□□ 0.35
OTOP1Q7RTM1 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
OTOP1Q7RTM1 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
OTOP1Q7RTM1 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
OTOP1Q7RTM1 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
OTOP1Q7RTM1 AL360270.3-201ENST00000609118 1348 ntBASIC17.21■□□□□ 0.35
OTOP1Q7RTM1 E2F3P2-201ENST00000447755 1422 ntBASIC17.21■□□□□ 0.35
OTOP1Q7RTM1 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
OTOP1Q7RTM1 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
OTOP1Q7RTM1 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC17.21■□□□□ 0.35
OTOP1Q7RTM1 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC17.21■□□□□ 0.35
OTOP1Q7RTM1 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17.21■□□□□ 0.35
OTOP1Q7RTM1 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
OTOP1Q7RTM1 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.21■□□□□ 0.35
OTOP1Q7RTM1 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC17.21■□□□□ 0.35
OTOP1Q7RTM1 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
OTOP1Q7RTM1 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
OTOP1Q7RTM1 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
OTOP1Q7RTM1 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
OTOP1Q7RTM1 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.21■□□□□ 0.35
OTOP1Q7RTM1 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
OTOP1Q7RTM1 MROH4P-201ENST00000431302 1578 ntBASIC17.21■□□□□ 0.35
OTOP1Q7RTM1 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
OTOP1Q7RTM1 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
OTOP1Q7RTM1 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
OTOP1Q7RTM1 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
OTOP1Q7RTM1 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
OTOP1Q7RTM1 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC17.21■□□□□ 0.35
OTOP1Q7RTM1 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
OTOP1Q7RTM1 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
OTOP1Q7RTM1 DUX4L46-201ENST00000566845 751 ntBASIC17.21■□□□□ 0.35
OTOP1Q7RTM1 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
OTOP1Q7RTM1 AP003392.6-201ENST00000607709 325 ntBASIC17.21■□□□□ 0.35
OTOP1Q7RTM1 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
OTOP1Q7RTM1 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
OTOP1Q7RTM1 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
OTOP1Q7RTM1 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.21■□□□□ 0.35
OTOP1Q7RTM1 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
OTOP1Q7RTM1 AP000593.2-201ENST00000542775 1433 ntBASIC17.21■□□□□ 0.34
OTOP1Q7RTM1 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.21■□□□□ 0.34
OTOP1Q7RTM1 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.21■□□□□ 0.34
OTOP1Q7RTM1 FKBP4P6-201ENST00000457486 1332 ntBASIC17.21■□□□□ 0.34
OTOP1Q7RTM1 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
OTOP1Q7RTM1 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
OTOP1Q7RTM1 AC055811.4-201ENST00000624039 1754 ntBASIC17.2■□□□□ 0.34
OTOP1Q7RTM1 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
OTOP1Q7RTM1 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.2■□□□□ 0.34
OTOP1Q7RTM1 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC17.2■□□□□ 0.34
OTOP1Q7RTM1 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms