Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 RN7SL618P-201ENST00000477850 296 ntBASIC13.66□□□□□ -0.22
SHFQ7M4L6 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SHFQ7M4L6 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.66□□□□□ -0.22
SHFQ7M4L6 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.66□□□□□ -0.22
SHFQ7M4L6 LINC01115-203ENST00000606068 577 ntBASIC13.66□□□□□ -0.22
SHFQ7M4L6 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.66□□□□□ -0.22
SHFQ7M4L6 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHFQ7M4L6 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
SHFQ7M4L6 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SHFQ7M4L6 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SHFQ7M4L6 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SHFQ7M4L6 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.66□□□□□ -0.22
SHFQ7M4L6 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SHFQ7M4L6 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHFQ7M4L6 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SHFQ7M4L6 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHFQ7M4L6 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHFQ7M4L6 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SHFQ7M4L6 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHFQ7M4L6 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
SHFQ7M4L6 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SHFQ7M4L6 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
SHFQ7M4L6 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHFQ7M4L6 AC138969.2-201ENST00000532739 9932 ntBASIC13.66□□□□□ -0.22
SHFQ7M4L6 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SHFQ7M4L6 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
SHFQ7M4L6 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.66□□□□□ -0.22
SHFQ7M4L6 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SHFQ7M4L6 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHFQ7M4L6 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
SHFQ7M4L6 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SHFQ7M4L6 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHFQ7M4L6 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SHFQ7M4L6 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHFQ7M4L6 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.65□□□□□ -0.22
SHFQ7M4L6 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.65□□□□□ -0.22
SHFQ7M4L6 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
SHFQ7M4L6 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
SHFQ7M4L6 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.65□□□□□ -0.22
SHFQ7M4L6 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.65□□□□□ -0.22
SHFQ7M4L6 AC011474.4-201ENST00000623523 2076 ntBASIC13.65□□□□□ -0.22
SHFQ7M4L6 AL121723.1-201ENST00000445194 1519 ntBASIC13.65□□□□□ -0.22
SHFQ7M4L6 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHFQ7M4L6 MST1P2-201ENST00000457982 2291 ntBASIC13.65□□□□□ -0.22
SHFQ7M4L6 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHFQ7M4L6 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHFQ7M4L6 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHFQ7M4L6 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SHFQ7M4L6 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHFQ7M4L6 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHFQ7M4L6 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SHFQ7M4L6 MBLAC2-202ENST00000514906 1936 ntBASIC13.65□□□□□ -0.22
SHFQ7M4L6 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.65□□□□□ -0.22
SHFQ7M4L6 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHFQ7M4L6 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHFQ7M4L6 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHFQ7M4L6 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
SHFQ7M4L6 AC104457.1-201ENST00000401024 814 ntBASIC13.65□□□□□ -0.22
SHFQ7M4L6 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHFQ7M4L6 AP006288.1-201ENST00000446065 395 ntBASIC13.65□□□□□ -0.22
SHFQ7M4L6 SDHAP3-202ENST00000515467 728 ntBASIC13.65□□□□□ -0.22
SHFQ7M4L6 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.65□□□□□ -0.22
SHFQ7M4L6 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.65□□□□□ -0.22
SHFQ7M4L6 SNHG9-202ENST00000564014 471 ntBASIC13.65□□□□□ -0.22
SHFQ7M4L6 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SHFQ7M4L6 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.65□□□□□ -0.22
SHFQ7M4L6 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SHFQ7M4L6 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHFQ7M4L6 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.65□□□□□ -0.22
SHFQ7M4L6 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
SHFQ7M4L6 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHFQ7M4L6 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHFQ7M4L6 AC087386.2-201ENST00000623212 4637 ntBASIC13.65□□□□□ -0.22
SHFQ7M4L6 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SHFQ7M4L6 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.65□□□□□ -0.22
SHFQ7M4L6 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.65□□□□□ -0.22
SHFQ7M4L6 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
SHFQ7M4L6 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SHFQ7M4L6 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.65□□□□□ -0.22
SHFQ7M4L6 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHFQ7M4L6 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SHFQ7M4L6 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHFQ7M4L6 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SHFQ7M4L6 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHFQ7M4L6 CICP17-201ENST00000418553 2377 ntBASIC13.65□□□□□ -0.22
SHFQ7M4L6 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHFQ7M4L6 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SHFQ7M4L6 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
SHFQ7M4L6 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SHFQ7M4L6 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
SHFQ7M4L6 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHFQ7M4L6 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHFQ7M4L6 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SHFQ7M4L6 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SHFQ7M4L6 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SHFQ7M4L6 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.64□□□□□ -0.23
SHFQ7M4L6 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SHFQ7M4L6 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SHFQ7M4L6 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SHFQ7M4L6 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms