Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAPH1Q70E73 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAPH1Q70E73 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAPH1Q70E73 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAPH1Q70E73 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAPH1Q70E73 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAPH1Q70E73 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAPH1Q70E73 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAPH1Q70E73 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC15.19■□□□□ 0.02
RAPH1Q70E73 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.19■□□□□ 0.02
RAPH1Q70E73 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAPH1Q70E73 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAPH1Q70E73 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAPH1Q70E73 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAPH1Q70E73 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAPH1Q70E73 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAPH1Q70E73 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAPH1Q70E73 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAPH1Q70E73 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAPH1Q70E73 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAPH1Q70E73 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAPH1Q70E73 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAPH1Q70E73 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.19■□□□□ 0.02
RAPH1Q70E73 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAPH1Q70E73 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAPH1Q70E73 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.19■□□□□ 0.02
RAPH1Q70E73 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAPH1Q70E73 AC004066.1-201ENST00000502488 802 ntBASIC15.19■□□□□ 0.02
RAPH1Q70E73 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAPH1Q70E73 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
RAPH1Q70E73 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.19■□□□□ 0.02
RAPH1Q70E73 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.19■□□□□ 0.02
RAPH1Q70E73 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RAPH1Q70E73 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.19■□□□□ 0.02
RAPH1Q70E73 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.19■□□□□ 0.02
RAPH1Q70E73 AC000095.1-201ENST00000603208 874 ntBASIC15.19■□□□□ 0.02
RAPH1Q70E73 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAPH1Q70E73 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC15.19■□□□□ 0.02
RAPH1Q70E73 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAPH1Q70E73 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAPH1Q70E73 BX640514.1-201ENST00000583223 1918 ntBASIC15.19■□□□□ 0.02
RAPH1Q70E73 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAPH1Q70E73 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.19■□□□□ 0.02
RAPH1Q70E73 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
RAPH1Q70E73 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAPH1Q70E73 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RAPH1Q70E73 AL928921.2-201ENST00000641325 2442 ntBASIC15.18■□□□□ 0.02
RAPH1Q70E73 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC15.18■□□□□ 0.02
RAPH1Q70E73 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RAPH1Q70E73 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAPH1Q70E73 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAPH1Q70E73 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RAPH1Q70E73 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAPH1Q70E73 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAPH1Q70E73 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RAPH1Q70E73 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAPH1Q70E73 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC15.18■□□□□ 0.02
RAPH1Q70E73 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAPH1Q70E73 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.18■□□□□ 0.02
RAPH1Q70E73 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAPH1Q70E73 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.18■□□□□ 0.02
RAPH1Q70E73 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAPH1Q70E73 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAPH1Q70E73 MIR1233-2-201ENST00000408138 82 ntBASIC15.18■□□□□ 0.02
RAPH1Q70E73 MIR1233-1-201ENST00000408722 82 ntBASIC15.18■□□□□ 0.02
RAPH1Q70E73 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.18■□□□□ 0.02
RAPH1Q70E73 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.18■□□□□ 0.02
RAPH1Q70E73 FAM86GP-201ENST00000448322 971 ntBASIC15.18■□□□□ 0.02
RAPH1Q70E73 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.18■□□□□ 0.02
RAPH1Q70E73 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RAPH1Q70E73 AC067863.1-201ENST00000494933 530 ntBASIC15.18■□□□□ 0.02
RAPH1Q70E73 IGHV3-42-201ENST00000520410 361 ntBASIC15.18■□□□□ 0.02
RAPH1Q70E73 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAPH1Q70E73 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.18■□□□□ 0.02
RAPH1Q70E73 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.18■□□□□ 0.02
RAPH1Q70E73 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.18■□□□□ 0.02
RAPH1Q70E73 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.18■□□□□ 0.02
RAPH1Q70E73 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
RAPH1Q70E73 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAPH1Q70E73 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.18■□□□□ 0.02
RAPH1Q70E73 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.18■□□□□ 0.02
RAPH1Q70E73 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAPH1Q70E73 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.18■□□□□ 0.02
RAPH1Q70E73 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAPH1Q70E73 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.18■□□□□ 0.02
RAPH1Q70E73 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAPH1Q70E73 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RAPH1Q70E73 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAPH1Q70E73 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.18■□□□□ 0.02
RAPH1Q70E73 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RAPH1Q70E73 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RAPH1Q70E73 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RAPH1Q70E73 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAPH1Q70E73 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RAPH1Q70E73 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.17■□□□□ 0.02
RAPH1Q70E73 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RAPH1Q70E73 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RAPH1Q70E73 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.17■□□□□ 0.02
RAPH1Q70E73 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RAPH1Q70E73 AL031595.1-201ENST00000623969 4709 ntBASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms