Protein–RNA interactions for Protein: Q70CQ4

USP31, Ubiquitin carboxyl-terminal hydrolase 31, humanhuman

Predictions only

Length 1,352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP31Q70CQ4 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
USP31Q70CQ4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP31Q70CQ4 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC19.65■□□□□ 0.74
USP31Q70CQ4 MARK2P16-201ENST00000605714 1723 ntBASIC19.65■□□□□ 0.74
USP31Q70CQ4 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP31Q70CQ4 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP31Q70CQ4 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC19.65■□□□□ 0.74
USP31Q70CQ4 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC19.65■□□□□ 0.74
USP31Q70CQ4 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC19.65■□□□□ 0.74
USP31Q70CQ4 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC19.65■□□□□ 0.74
USP31Q70CQ4 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC19.65■□□□□ 0.74
USP31Q70CQ4 KRT8P1-201ENST00000557533 1207 ntBASIC19.65■□□□□ 0.74
USP31Q70CQ4 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC19.65■□□□□ 0.74
USP31Q70CQ4 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC19.65■□□□□ 0.74
USP31Q70CQ4 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC19.65■□□□□ 0.74
USP31Q70CQ4 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC19.65■□□□□ 0.74
USP31Q70CQ4 GMFG-209ENST00000600322 622 ntTSL 5 BASIC19.65■□□□□ 0.74
USP31Q70CQ4 AC090386.2-201ENST00000623010 1039 ntBASIC19.65■□□□□ 0.74
USP31Q70CQ4 AC005618.3-201ENST00000624928 458 ntBASIC19.65■□□□□ 0.74
USP31Q70CQ4 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP31Q70CQ4 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC19.65■□□□□ 0.74
USP31Q70CQ4 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC19.65■□□□□ 0.74
USP31Q70CQ4 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC19.65■□□□□ 0.74
USP31Q70CQ4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
USP31Q70CQ4 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP31Q70CQ4 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP31Q70CQ4 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP31Q70CQ4 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP31Q70CQ4 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC19.65■□□□□ 0.74
USP31Q70CQ4 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
USP31Q70CQ4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
USP31Q70CQ4 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
USP31Q70CQ4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
USP31Q70CQ4 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP31Q70CQ4 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP31Q70CQ4 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP31Q70CQ4 AC018442.1-201ENST00000421439 2061 ntBASIC19.64■□□□□ 0.73
USP31Q70CQ4 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP31Q70CQ4 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP31Q70CQ4 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP31Q70CQ4 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC19.64■□□□□ 0.73
USP31Q70CQ4 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC19.64■□□□□ 0.73
USP31Q70CQ4 AL355334.1-201ENST00000417713 215 ntBASIC19.64■□□□□ 0.73
USP31Q70CQ4 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC19.64■□□□□ 0.73
USP31Q70CQ4 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP31Q70CQ4 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC19.64■□□□□ 0.73
USP31Q70CQ4 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC19.64■□□□□ 0.73
USP31Q70CQ4 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC19.64■□□□□ 0.73
USP31Q70CQ4 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC19.64■□□□□ 0.73
USP31Q70CQ4 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC19.64■□□□□ 0.73
USP31Q70CQ4 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP31Q70CQ4 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP31Q70CQ4 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC19.64■□□□□ 0.73
USP31Q70CQ4 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP31Q70CQ4 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC19.64■□□□□ 0.73
USP31Q70CQ4 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP31Q70CQ4 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP31Q70CQ4 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP31Q70CQ4 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP31Q70CQ4 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP31Q70CQ4 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
USP31Q70CQ4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
USP31Q70CQ4 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
USP31Q70CQ4 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP31Q70CQ4 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP31Q70CQ4 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
USP31Q70CQ4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.63■□□□□ 0.73
USP31Q70CQ4 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC19.63■□□□□ 0.73
USP31Q70CQ4 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
USP31Q70CQ4 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
USP31Q70CQ4 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP31Q70CQ4 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP31Q70CQ4 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
USP31Q70CQ4 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP31Q70CQ4 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP31Q70CQ4 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP31Q70CQ4 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC19.63■□□□□ 0.73
USP31Q70CQ4 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
USP31Q70CQ4 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC19.63■□□□□ 0.73
USP31Q70CQ4 RN7SL277P-201ENST00000481521 288 ntBASIC19.63■□□□□ 0.73
USP31Q70CQ4 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC19.63■□□□□ 0.73
USP31Q70CQ4 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC19.63■□□□□ 0.73
USP31Q70CQ4 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC19.63■□□□□ 0.73
USP31Q70CQ4 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC19.63■□□□□ 0.73
USP31Q70CQ4 AP001065.2-201ENST00000617205 644 ntBASIC19.63■□□□□ 0.73
USP31Q70CQ4 MIR6858-201ENST00000620733 67 ntBASIC19.63■□□□□ 0.73
USP31Q70CQ4 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
USP31Q70CQ4 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP31Q70CQ4 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
USP31Q70CQ4 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
USP31Q70CQ4 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
USP31Q70CQ4 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP31Q70CQ4 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP31Q70CQ4 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP31Q70CQ4 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC19.63■□□□□ 0.73
USP31Q70CQ4 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP31Q70CQ4 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
USP31Q70CQ4 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP31Q70CQ4 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
USP31Q70CQ4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms