Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 AP000845.1-201ENST00000581677 2131 ntBASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RFWD3Q6PCD5 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RFWD3Q6PCD5 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.71■□□□□ 0.1
RFWD3Q6PCD5 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
RFWD3Q6PCD5 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.71■□□□□ 0.1
RFWD3Q6PCD5 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RFWD3Q6PCD5 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RFWD3Q6PCD5 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RFWD3Q6PCD5 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
RFWD3Q6PCD5 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFWD3Q6PCD5 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RFWD3Q6PCD5 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RFWD3Q6PCD5 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RFWD3Q6PCD5 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFWD3Q6PCD5 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFWD3Q6PCD5 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.7■□□□□ 0.1
RFWD3Q6PCD5 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFWD3Q6PCD5 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.7■□□□□ 0.1
RFWD3Q6PCD5 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFWD3Q6PCD5 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RFWD3Q6PCD5 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RFWD3Q6PCD5 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFWD3Q6PCD5 AC126365.1-201ENST00000578585 1514 ntBASIC15.7■□□□□ 0.1
RFWD3Q6PCD5 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RFWD3Q6PCD5 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RFWD3Q6PCD5 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFWD3Q6PCD5 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RFWD3Q6PCD5 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFWD3Q6PCD5 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFWD3Q6PCD5 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFWD3Q6PCD5 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.7■□□□□ 0.1
RFWD3Q6PCD5 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.7■□□□□ 0.1
RFWD3Q6PCD5 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.7■□□□□ 0.1
RFWD3Q6PCD5 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RFWD3Q6PCD5 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RFWD3Q6PCD5 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.7■□□□□ 0.1
RFWD3Q6PCD5 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.7■□□□□ 0.1
RFWD3Q6PCD5 AC138951.2-201ENST00000623455 1161 ntBASIC15.7■□□□□ 0.1
RFWD3Q6PCD5 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.7■□□□□ 0.1
RFWD3Q6PCD5 RHOXF1P1-202ENST00000635473 501 ntBASIC15.7■□□□□ 0.1
RFWD3Q6PCD5 FLJ16779-201ENST00000612722 7638 ntBASIC15.7■□□□□ 0.1
RFWD3Q6PCD5 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFWD3Q6PCD5 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFWD3Q6PCD5 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFWD3Q6PCD5 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.7■□□□□ 0.1
RFWD3Q6PCD5 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.7■□□□□ 0.1
RFWD3Q6PCD5 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFWD3Q6PCD5 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RFWD3Q6PCD5 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RFWD3Q6PCD5 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
RFWD3Q6PCD5 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
RFWD3Q6PCD5 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.7■□□□□ 0.1
RFWD3Q6PCD5 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.69■□□□□ 0.1
RFWD3Q6PCD5 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFWD3Q6PCD5 NFIC-211ENST00000641145 8399 ntBASIC15.69■□□□□ 0.1
RFWD3Q6PCD5 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RFWD3Q6PCD5 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.69■□□□□ 0.1
RFWD3Q6PCD5 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.69■□□□□ 0.1
RFWD3Q6PCD5 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
RFWD3Q6PCD5 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.69■□□□□ 0.1
RFWD3Q6PCD5 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFWD3Q6PCD5 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFWD3Q6PCD5 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RFWD3Q6PCD5 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RFWD3Q6PCD5 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFWD3Q6PCD5 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFWD3Q6PCD5 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.69■□□□□ 0.1
RFWD3Q6PCD5 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.69■□□□□ 0.1
RFWD3Q6PCD5 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.69■□□□□ 0.1
RFWD3Q6PCD5 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RFWD3Q6PCD5 AC022616.1-201ENST00000518688 554 ntBASIC15.69■□□□□ 0.1
RFWD3Q6PCD5 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RFWD3Q6PCD5 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.69■□□□□ 0.1
RFWD3Q6PCD5 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.69■□□□□ 0.1
RFWD3Q6PCD5 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.69■□□□□ 0.1
RFWD3Q6PCD5 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.69■□□□□ 0.1
RFWD3Q6PCD5 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RFWD3Q6PCD5 AC132938.4-201ENST00000623835 848 ntBASIC15.69■□□□□ 0.1
RFWD3Q6PCD5 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFWD3Q6PCD5 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFWD3Q6PCD5 AC012508.2-201ENST00000567613 1472 ntBASIC15.69■□□□□ 0.1
RFWD3Q6PCD5 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFWD3Q6PCD5 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.69■□□□□ 0.1
RFWD3Q6PCD5 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RFWD3Q6PCD5 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RFWD3Q6PCD5 AC055811.4-201ENST00000624039 1754 ntBASIC15.69■□□□□ 0.1
RFWD3Q6PCD5 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFWD3Q6PCD5 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFWD3Q6PCD5 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.69■□□□□ 0.1
RFWD3Q6PCD5 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RFWD3Q6PCD5 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms