Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
CDC42BPAQ5VT25 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC22■■□□□ 1.11
CDC42BPAQ5VT25 LINC00431-202ENST00000636375 159 ntBASIC22■■□□□ 1.11
CDC42BPAQ5VT25 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CDC42BPAQ5VT25 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC21.99■■□□□ 1.11
CDC42BPAQ5VT25 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDC42BPAQ5VT25 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDC42BPAQ5VT25 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDC42BPAQ5VT25 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDC42BPAQ5VT25 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDC42BPAQ5VT25 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDC42BPAQ5VT25 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC21.99■■□□□ 1.11
CDC42BPAQ5VT25 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDC42BPAQ5VT25 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
CDC42BPAQ5VT25 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CDC42BPAQ5VT25 PPOX-204ENST00000462866 473 ntTSL 5 BASIC21.99■■□□□ 1.11
CDC42BPAQ5VT25 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC21.99■■□□□ 1.11
CDC42BPAQ5VT25 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC21.99■■□□□ 1.11
CDC42BPAQ5VT25 RN7SL357P-201ENST00000581065 298 ntBASIC21.99■■□□□ 1.11
CDC42BPAQ5VT25 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC21.99■■□□□ 1.11
CDC42BPAQ5VT25 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CDC42BPAQ5VT25 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDC42BPAQ5VT25 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDC42BPAQ5VT25 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC21.99■■□□□ 1.11
CDC42BPAQ5VT25 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDC42BPAQ5VT25 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDC42BPAQ5VT25 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC21.98■■□□□ 1.11
CDC42BPAQ5VT25 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CDC42BPAQ5VT25 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CDC42BPAQ5VT25 TEKT4P2-202ENST00000559466 1312 ntBASIC21.98■■□□□ 1.11
CDC42BPAQ5VT25 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
CDC42BPAQ5VT25 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC21.98■■□□□ 1.11
CDC42BPAQ5VT25 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CDC42BPAQ5VT25 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDC42BPAQ5VT25 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CDC42BPAQ5VT25 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDC42BPAQ5VT25 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CDC42BPAQ5VT25 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDC42BPAQ5VT25 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC21.98■■□□□ 1.11
CDC42BPAQ5VT25 PPIA-208ENST00000489459 907 ntTSL 2 BASIC21.98■■□□□ 1.11
CDC42BPAQ5VT25 AC093909.3-201ENST00000504783 336 ntBASIC21.98■■□□□ 1.11
CDC42BPAQ5VT25 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC21.98■■□□□ 1.11
CDC42BPAQ5VT25 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC21.98■■□□□ 1.11
CDC42BPAQ5VT25 KRT8P2-201ENST00000556193 944 ntBASIC21.98■■□□□ 1.11
CDC42BPAQ5VT25 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC21.98■■□□□ 1.11
CDC42BPAQ5VT25 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC21.98■■□□□ 1.11
CDC42BPAQ5VT25 PPIA-210ENST00000620047 827 ntTSL 5 BASIC21.98■■□□□ 1.11
CDC42BPAQ5VT25 AC073592.2-201ENST00000623062 780 ntBASIC21.98■■□□□ 1.11
CDC42BPAQ5VT25 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC21.98■■□□□ 1.11
CDC42BPAQ5VT25 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CDC42BPAQ5VT25 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CDC42BPAQ5VT25 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDC42BPAQ5VT25 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDC42BPAQ5VT25 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CDC42BPAQ5VT25 PARN-202ENST00000420015 2360 ntTSL 2 BASIC21.98■■□□□ 1.11
CDC42BPAQ5VT25 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC21.98■■□□□ 1.11
CDC42BPAQ5VT25 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDC42BPAQ5VT25 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDC42BPAQ5VT25 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
CDC42BPAQ5VT25 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDC42BPAQ5VT25 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDC42BPAQ5VT25 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
CDC42BPAQ5VT25 AC006372.4-201ENST00000624122 1543 ntBASIC21.97■■□□□ 1.11
CDC42BPAQ5VT25 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDC42BPAQ5VT25 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDC42BPAQ5VT25 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDC42BPAQ5VT25 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDC42BPAQ5VT25 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDC42BPAQ5VT25 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC21.97■■□□□ 1.11
CDC42BPAQ5VT25 OR5BD1P-201ENST00000532527 817 ntBASIC21.97■■□□□ 1.11
CDC42BPAQ5VT25 FO393412.1-201ENST00000619841 382 ntBASIC21.97■■□□□ 1.11
CDC42BPAQ5VT25 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC21.97■■□□□ 1.11
CDC42BPAQ5VT25 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC21.97■■□□□ 1.11
CDC42BPAQ5VT25 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC21.97■■□□□ 1.11
CDC42BPAQ5VT25 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDC42BPAQ5VT25 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDC42BPAQ5VT25 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
CDC42BPAQ5VT25 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDC42BPAQ5VT25 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDC42BPAQ5VT25 AGAP7P-201ENST00000582299 2062 ntBASIC21.97■■□□□ 1.11
CDC42BPAQ5VT25 AGAP14-201ENST00000624701 2060 ntBASIC21.97■■□□□ 1.11
CDC42BPAQ5VT25 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CDC42BPAQ5VT25 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC21.97■■□□□ 1.11
CDC42BPAQ5VT25 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDC42BPAQ5VT25 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDC42BPAQ5VT25 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDC42BPAQ5VT25 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDC42BPAQ5VT25 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC21.97■■□□□ 1.11
CDC42BPAQ5VT25 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDC42BPAQ5VT25 ZEB1-AS1-208ENST00000607166 2503 ntBASIC21.97■■□□□ 1.11
CDC42BPAQ5VT25 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDC42BPAQ5VT25 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC21.97■■□□□ 1.11
CDC42BPAQ5VT25 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDC42BPAQ5VT25 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC21.97■■□□□ 1.11
CDC42BPAQ5VT25 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC21.97■■□□□ 1.11
CDC42BPAQ5VT25 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC21.97■■□□□ 1.11
CDC42BPAQ5VT25 AC010976.2-201ENST00000609697 852 ntBASIC21.97■■□□□ 1.11
CDC42BPAQ5VT25 AL118522.1-201ENST00000611368 560 ntBASIC21.97■■□□□ 1.11
CDC42BPAQ5VT25 AC138466.4-201ENST00000623965 852 ntBASIC21.97■■□□□ 1.11
CDC42BPAQ5VT25 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms