Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 AC015818.8-201ENST00000587907 1519 ntBASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 PTMS-202ENST00000389462 773 ntTSL 2 BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 AL133267.1-201ENST00000398220 340 ntBASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 CEND1P1-201ENST00000451006 455 ntBASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 RN7SL589P-201ENST00000481268 310 ntBASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 SLED1-202ENST00000512051 380 ntBASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 RNF34-208ENST00000555076 593 ntTSL 3 BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 LINC01225-203ENST00000563550 1244 ntBASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 AC091812.2-201ENST00000619081 385 ntBASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 ELL2P1-201ENST00000413990 1906 ntBASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.54□□□□□ -0.4
ANKRD55Q3KP44 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 KRT18P64-201ENST00000434946 1219 ntBASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 SPCS2P4-201ENST00000436160 681 ntBASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 GATB-205ENST00000508611 605 ntTSL 2 BASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 SNHG9-202ENST00000564014 471 ntBASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 IGHV3OR16-6-201ENST00000568775 360 ntBASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 AC006538.3-201ENST00000612495 578 ntBASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 CITED2-204ENST00000618718 901 ntTSL 2 BASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 CICP16-201ENST00000502609 2813 ntBASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
ANKRD55Q3KP44 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms