Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ERCC6LQ2NKX8 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC15.96■□□□□ 0.15
ERCC6LQ2NKX8 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ERCC6LQ2NKX8 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
ERCC6LQ2NKX8 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
ERCC6LQ2NKX8 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
ERCC6LQ2NKX8 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
ERCC6LQ2NKX8 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.96■□□□□ 0.15
ERCC6LQ2NKX8 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
ERCC6LQ2NKX8 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ERCC6LQ2NKX8 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ERCC6LQ2NKX8 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ERCC6LQ2NKX8 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
ERCC6LQ2NKX8 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
ERCC6LQ2NKX8 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
ERCC6LQ2NKX8 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ERCC6LQ2NKX8 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
ERCC6LQ2NKX8 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
ERCC6LQ2NKX8 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ERCC6LQ2NKX8 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ERCC6LQ2NKX8 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
ERCC6LQ2NKX8 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.96■□□□□ 0.15
ERCC6LQ2NKX8 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.96■□□□□ 0.15
ERCC6LQ2NKX8 RHOQP3-201ENST00000437982 621 ntBASIC15.96■□□□□ 0.15
ERCC6LQ2NKX8 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
ERCC6LQ2NKX8 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.96■□□□□ 0.15
ERCC6LQ2NKX8 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.96■□□□□ 0.15
ERCC6LQ2NKX8 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.96■□□□□ 0.15
ERCC6LQ2NKX8 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.96■□□□□ 0.15
ERCC6LQ2NKX8 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.96■□□□□ 0.15
ERCC6LQ2NKX8 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.96■□□□□ 0.15
ERCC6LQ2NKX8 AC010507.1-201ENST00000633895 436 ntBASIC15.96■□□□□ 0.15
ERCC6LQ2NKX8 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
ERCC6LQ2NKX8 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
ERCC6LQ2NKX8 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC15.96■□□□□ 0.15
ERCC6LQ2NKX8 OS9-206ENST00000435406 2346 ntTSL 2 BASIC15.96■□□□□ 0.15
ERCC6LQ2NKX8 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ERCC6LQ2NKX8 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ERCC6LQ2NKX8 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC15.96■□□□□ 0.15
ERCC6LQ2NKX8 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
ERCC6LQ2NKX8 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
ERCC6LQ2NKX8 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
ERCC6LQ2NKX8 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
ERCC6LQ2NKX8 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
ERCC6LQ2NKX8 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 AC072061.1-201ENST00000569710 2234 ntBASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 VN2R19P-201ENST00000442399 1052 ntBASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 AC079781.3-201ENST00000449110 356 ntBASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 AL161645.1-201ENST00000622716 1255 ntBASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 AL645728.2-202ENST00000641679 227 ntBASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
ERCC6LQ2NKX8 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
ERCC6LQ2NKX8 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
ERCC6LQ2NKX8 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
ERCC6LQ2NKX8 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.94■□□□□ 0.14
ERCC6LQ2NKX8 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC15.94■□□□□ 0.14
ERCC6LQ2NKX8 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
ERCC6LQ2NKX8 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms