Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.78□□□□□ -0.04
CLDN2P57739 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CLDN2P57739 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN2P57739 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
CLDN2P57739 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN2P57739 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN2P57739 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.78□□□□□ -0.04
CLDN2P57739 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CLDN2P57739 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CLDN2P57739 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.78□□□□□ -0.04
CLDN2P57739 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.78□□□□□ -0.04
CLDN2P57739 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.77□□□□□ -0.04
CLDN2P57739 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
CLDN2P57739 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
CLDN2P57739 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLDN2P57739 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
CLDN2P57739 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
CLDN2P57739 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLDN2P57739 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.77□□□□□ -0.04
CLDN2P57739 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLDN2P57739 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.77□□□□□ -0.04
CLDN2P57739 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLDN2P57739 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLDN2P57739 AC003102.2-201ENST00000589195 1469 ntBASIC14.77□□□□□ -0.04
CLDN2P57739 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.77□□□□□ -0.04
CLDN2P57739 AC138035.3-201ENST00000622706 2791 ntBASIC14.77□□□□□ -0.04
CLDN2P57739 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLDN2P57739 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CLDN2P57739 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.77□□□□□ -0.04
CLDN2P57739 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CLDN2P57739 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLDN2P57739 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CLDN2P57739 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.77□□□□□ -0.05
CLDN2P57739 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN2P57739 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN2P57739 DPM3-202ENST00000368399 517 ntBASIC14.77□□□□□ -0.05
CLDN2P57739 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.77□□□□□ -0.05
CLDN2P57739 KRTAP19-9P-201ENST00000421795 191 ntBASIC14.77□□□□□ -0.05
CLDN2P57739 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.77□□□□□ -0.05
CLDN2P57739 SPTLC1P5-201ENST00000450718 252 ntBASIC14.77□□□□□ -0.05
CLDN2P57739 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.77□□□□□ -0.05
CLDN2P57739 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.77□□□□□ -0.05
CLDN2P57739 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.77□□□□□ -0.05
CLDN2P57739 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN2P57739 RHOQP1-201ENST00000555758 579 ntBASIC14.77□□□□□ -0.05
CLDN2P57739 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.77□□□□□ -0.05
CLDN2P57739 BNIP3P13-201ENST00000599968 566 ntBASIC14.77□□□□□ -0.05
CLDN2P57739 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.77□□□□□ -0.05
CLDN2P57739 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.77□□□□□ -0.05
CLDN2P57739 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.77□□□□□ -0.05
CLDN2P57739 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
CLDN2P57739 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.77□□□□□ -0.05
CLDN2P57739 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN2P57739 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN2P57739 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN2P57739 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.77□□□□□ -0.05
CLDN2P57739 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.77□□□□□ -0.05
CLDN2P57739 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN2P57739 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN2P57739 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN2P57739 AC004899.1-201ENST00000424687 1714 ntBASIC14.77□□□□□ -0.05
CLDN2P57739 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CLDN2P57739 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN2P57739 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN2P57739 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CLDN2P57739 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CLDN2P57739 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.76□□□□□ -0.05
CLDN2P57739 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CLDN2P57739 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CLDN2P57739 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN2P57739 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN2P57739 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN2P57739 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CLDN2P57739 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CLDN2P57739 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN2P57739 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN2P57739 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN2P57739 WASH3P-207ENST00000560956 1394 ntBASIC14.76□□□□□ -0.05
CLDN2P57739 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CLDN2P57739 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CLDN2P57739 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
CLDN2P57739 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.76□□□□□ -0.05
CLDN2P57739 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN2P57739 SALL4P5-201ENST00000419001 1760 ntBASIC14.76□□□□□ -0.05
CLDN2P57739 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CLDN2P57739 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
CLDN2P57739 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN2P57739 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN2P57739 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CLDN2P57739 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN2P57739 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN2P57739 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.76□□□□□ -0.05
CLDN2P57739 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN2P57739 AK6-201ENST00000380818 1183 ntTSL 2 BASIC14.76□□□□□ -0.05
CLDN2P57739 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN2P57739 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC14.76□□□□□ -0.05
CLDN2P57739 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CLDN2P57739 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.76□□□□□ -0.05
CLDN2P57739 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.76□□□□□ -0.05
CLDN2P57739 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms