Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC015802.1-201ENST00000588104 1449 ntBASIC14.75□□□□□ -0.05
CDH13P55290 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDH13P55290 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.75□□□□□ -0.05
CDH13P55290 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
CDH13P55290 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH13P55290 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CDH13P55290 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDH13P55290 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH13P55290 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH13P55290 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.75□□□□□ -0.05
CDH13P55290 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
CDH13P55290 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.75□□□□□ -0.05
CDH13P55290 MRPS18AP1-201ENST00000414458 589 ntBASIC14.75□□□□□ -0.05
CDH13P55290 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.75□□□□□ -0.05
CDH13P55290 AL512638.1-201ENST00000457493 794 ntBASIC14.75□□□□□ -0.05
CDH13P55290 DOC2GP-202ENST00000514950 1163 ntBASIC14.75□□□□□ -0.05
CDH13P55290 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.75□□□□□ -0.05
CDH13P55290 TPRX2P-201ENST00000535362 881 ntBASIC14.75□□□□□ -0.05
CDH13P55290 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDH13P55290 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.75□□□□□ -0.05
CDH13P55290 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
CDH13P55290 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.75□□□□□ -0.05
CDH13P55290 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.75□□□□□ -0.05
CDH13P55290 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.75□□□□□ -0.05
CDH13P55290 AC106028.4-201ENST00000614509 607 ntBASIC14.75□□□□□ -0.05
CDH13P55290 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.75□□□□□ -0.05
CDH13P55290 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH13P55290 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.75□□□□□ -0.05
CDH13P55290 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.75□□□□□ -0.05
CDH13P55290 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.75□□□□□ -0.05
CDH13P55290 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CDH13P55290 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH13P55290 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.75□□□□□ -0.05
CDH13P55290 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH13P55290 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH13P55290 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CDH13P55290 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH13P55290 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH13P55290 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.74□□□□□ -0.05
CDH13P55290 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDH13P55290 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH13P55290 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDH13P55290 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
CDH13P55290 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH13P55290 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH13P55290 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDH13P55290 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH13P55290 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH13P55290 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH13P55290 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDH13P55290 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH13P55290 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDH13P55290 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.74□□□□□ -0.05
CDH13P55290 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDH13P55290 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.74□□□□□ -0.05
CDH13P55290 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.74□□□□□ -0.05
CDH13P55290 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.74□□□□□ -0.05
CDH13P55290 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDH13P55290 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.74□□□□□ -0.05
CDH13P55290 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDH13P55290 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
CDH13P55290 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.74□□□□□ -0.05
CDH13P55290 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.74□□□□□ -0.05
CDH13P55290 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
CDH13P55290 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH13P55290 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.74□□□□□ -0.05
CDH13P55290 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CDH13P55290 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH13P55290 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH13P55290 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH13P55290 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.74□□□□□ -0.05
CDH13P55290 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH13P55290 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH13P55290 AL354702.1-201ENST00000442006 1960 ntBASIC14.74□□□□□ -0.05
CDH13P55290 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.74□□□□□ -0.05
CDH13P55290 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDH13P55290 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH13P55290 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.74□□□□□ -0.05
CDH13P55290 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDH13P55290 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
CDH13P55290 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDH13P55290 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
CDH13P55290 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.73□□□□□ -0.05
CDH13P55290 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH13P55290 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH13P55290 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CDH13P55290 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.73□□□□□ -0.05
CDH13P55290 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH13P55290 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH13P55290 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDH13P55290 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CDH13P55290 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.73□□□□□ -0.05
CDH13P55290 AC136759.1-202ENST00000530858 2194 ntBASIC14.73□□□□□ -0.05
CDH13P55290 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDH13P55290 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDH13P55290 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH13P55290 SPDYE19P-201ENST00000338590 713 ntBASIC14.73□□□□□ -0.05
CDH13P55290 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.73□□□□□ -0.05
CDH13P55290 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CDH13P55290 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms