Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AC087499.6-201ENST00000411576 835 ntBASIC16.52■□□□□ 0.24
PMS1P54277 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.52■□□□□ 0.24
PMS1P54277 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PMS1P54277 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.52■□□□□ 0.24
PMS1P54277 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.52■□□□□ 0.24
PMS1P54277 AC190387.1-201ENST00000551683 408 ntBASIC16.52■□□□□ 0.24
PMS1P54277 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.52■□□□□ 0.24
PMS1P54277 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.52■□□□□ 0.24
PMS1P54277 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.52■□□□□ 0.24
PMS1P54277 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.52■□□□□ 0.24
PMS1P54277 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PMS1P54277 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PMS1P54277 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.52■□□□□ 0.23
PMS1P54277 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.52■□□□□ 0.23
PMS1P54277 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PMS1P54277 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PMS1P54277 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PMS1P54277 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC16.52■□□□□ 0.23
PMS1P54277 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
PMS1P54277 RDX-218ENST00000544551 4117 ntTSL 2 BASIC16.51■□□□□ 0.23
PMS1P54277 BANP-203ENST00000393207 2438 ntTSL 2 BASIC16.51■□□□□ 0.23
PMS1P54277 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PMS1P54277 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PMS1P54277 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PMS1P54277 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PMS1P54277 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PMS1P54277 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PMS1P54277 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PMS1P54277 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.51■□□□□ 0.23
PMS1P54277 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PMS1P54277 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PMS1P54277 TNN-203ENST00000622870 3719 ntTSL 5 BASIC16.51■□□□□ 0.23
PMS1P54277 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
PMS1P54277 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.51■□□□□ 0.23
PMS1P54277 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PMS1P54277 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PMS1P54277 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PMS1P54277 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PMS1P54277 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PMS1P54277 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PMS1P54277 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.51■□□□□ 0.23
PMS1P54277 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.51■□□□□ 0.23
PMS1P54277 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.51■□□□□ 0.23
PMS1P54277 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.51■□□□□ 0.23
PMS1P54277 CU634019.7-201ENST00000624153 1185 ntBASIC16.51■□□□□ 0.23
PMS1P54277 FP236241.2-201ENST00000624906 1185 ntBASIC16.51■□□□□ 0.23
PMS1P54277 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC16.51■□□□□ 0.23
PMS1P54277 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
PMS1P54277 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.51■□□□□ 0.23
PMS1P54277 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PMS1P54277 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC16.51■□□□□ 0.23
PMS1P54277 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PMS1P54277 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
PMS1P54277 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PMS1P54277 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.51■□□□□ 0.23
PMS1P54277 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PMS1P54277 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PMS1P54277 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.5■□□□□ 0.23
PMS1P54277 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PMS1P54277 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PMS1P54277 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PMS1P54277 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PMS1P54277 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
PMS1P54277 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PMS1P54277 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PMS1P54277 ACKR1-201ENST00000368121 1240 ntBASIC16.5■□□□□ 0.23
PMS1P54277 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PMS1P54277 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PMS1P54277 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.5■□□□□ 0.23
PMS1P54277 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PMS1P54277 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.5■□□□□ 0.23
PMS1P54277 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PMS1P54277 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.5■□□□□ 0.23
PMS1P54277 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PMS1P54277 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.5■□□□□ 0.23
PMS1P54277 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.5■□□□□ 0.23
PMS1P54277 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
PMS1P54277 SALL4P5-201ENST00000419001 1760 ntBASIC16.5■□□□□ 0.23
PMS1P54277 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PMS1P54277 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.5■□□□□ 0.23
PMS1P54277 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PMS1P54277 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PMS1P54277 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PMS1P54277 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PMS1P54277 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PMS1P54277 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PMS1P54277 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.5■□□□□ 0.23
PMS1P54277 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PMS1P54277 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PMS1P54277 AL365209.1-201ENST00000624418 6473 ntBASIC16.5■□□□□ 0.23
PMS1P54277 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PMS1P54277 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PMS1P54277 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC16.5■□□□□ 0.23
PMS1P54277 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PMS1P54277 LRRC59-203ENST00000576448 1531 ntBASIC16.5■□□□□ 0.23
PMS1P54277 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PMS1P54277 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PMS1P54277 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.49■□□□□ 0.23
PMS1P54277 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PMS1P54277 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms