Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.18■□□□□ 0.02
LIMK2P53671 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LIMK2P53671 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.17■□□□□ 0.02
LIMK2P53671 AC015802.1-201ENST00000588104 1449 ntBASIC15.17■□□□□ 0.02
LIMK2P53671 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.17■□□□□ 0.02
LIMK2P53671 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.17■□□□□ 0.02
LIMK2P53671 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.17■□□□□ 0.02
LIMK2P53671 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.17■□□□□ 0.02
LIMK2P53671 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LIMK2P53671 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
LIMK2P53671 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LIMK2P53671 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LIMK2P53671 AC015656.1-201ENST00000624209 3578 ntBASIC15.17■□□□□ 0.02
LIMK2P53671 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC15.17■□□□□ 0.02
LIMK2P53671 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.17■□□□□ 0.02
LIMK2P53671 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
LIMK2P53671 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
LIMK2P53671 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LIMK2P53671 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
LIMK2P53671 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LIMK2P53671 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.17■□□□□ 0.02
LIMK2P53671 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LIMK2P53671 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
LIMK2P53671 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
LIMK2P53671 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LIMK2P53671 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LIMK2P53671 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LIMK2P53671 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
LIMK2P53671 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LIMK2P53671 BOLA2P3-201ENST00000404566 256 ntBASIC15.17■□□□□ 0.02
LIMK2P53671 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.17■□□□□ 0.02
LIMK2P53671 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.17■□□□□ 0.02
LIMK2P53671 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.17■□□□□ 0.02
LIMK2P53671 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LIMK2P53671 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.17■□□□□ 0.02
LIMK2P53671 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.17■□□□□ 0.02
LIMK2P53671 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.17■□□□□ 0.02
LIMK2P53671 AP005482.1-201ENST00000563722 1273 ntBASIC15.17■□□□□ 0.02
LIMK2P53671 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
LIMK2P53671 CU634019.7-201ENST00000624153 1185 ntBASIC15.17■□□□□ 0.02
LIMK2P53671 FP236241.2-201ENST00000624906 1185 ntBASIC15.17■□□□□ 0.02
LIMK2P53671 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LIMK2P53671 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
LIMK2P53671 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LIMK2P53671 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.17■□□□□ 0.02
LIMK2P53671 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LIMK2P53671 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LIMK2P53671 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
LIMK2P53671 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LIMK2P53671 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LIMK2P53671 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
LIMK2P53671 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LIMK2P53671 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LIMK2P53671 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LIMK2P53671 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LIMK2P53671 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LIMK2P53671 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LIMK2P53671 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LIMK2P53671 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LIMK2P53671 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.16■□□□□ 0.02
LIMK2P53671 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.16■□□□□ 0.02
LIMK2P53671 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LIMK2P53671 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LIMK2P53671 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LIMK2P53671 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LIMK2P53671 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LIMK2P53671 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
LIMK2P53671 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.16■□□□□ 0.02
LIMK2P53671 AC018665.1-201ENST00000622927 1362 ntBASIC15.16■□□□□ 0.02
LIMK2P53671 AC027601.5-201ENST00000624065 2482 ntBASIC15.16■□□□□ 0.02
LIMK2P53671 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
LIMK2P53671 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LIMK2P53671 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LIMK2P53671 HLA-K-203ENST00000430151 1046 ntBASIC15.16■□□□□ 0.02
LIMK2P53671 KRT43P-201ENST00000434019 910 ntBASIC15.16■□□□□ 0.02
LIMK2P53671 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC15.16■□□□□ 0.02
LIMK2P53671 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LIMK2P53671 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.16■□□□□ 0.02
LIMK2P53671 RPL13AP25-201ENST00000484130 612 ntBASIC15.16■□□□□ 0.02
LIMK2P53671 USP32P1-208ENST00000506594 1164 ntBASIC15.16■□□□□ 0.02
LIMK2P53671 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
LIMK2P53671 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.16■□□□□ 0.02
LIMK2P53671 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.16■□□□□ 0.02
LIMK2P53671 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.16■□□□□ 0.02
LIMK2P53671 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LIMK2P53671 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.16■□□□□ 0.02
LIMK2P53671 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.16■□□□□ 0.02
LIMK2P53671 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LIMK2P53671 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LIMK2P53671 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LIMK2P53671 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LIMK2P53671 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LIMK2P53671 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LIMK2P53671 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LIMK2P53671 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
LIMK2P53671 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LIMK2P53671 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LIMK2P53671 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LIMK2P53671 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.16■□□□□ 0.02
LIMK2P53671 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms