Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC6A12P48065 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SLC6A12P48065 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC6A12P48065 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SLC6A12P48065 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC6A12P48065 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SLC6A12P48065 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC6A12P48065 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC6A12P48065 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC6A12P48065 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SLC6A12P48065 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SLC6A12P48065 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.45□□□□□ -0.1
SLC6A12P48065 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.44□□□□□ -0.1
SLC6A12P48065 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SLC6A12P48065 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC6A12P48065 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC6A12P48065 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC6A12P48065 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC6A12P48065 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.44□□□□□ -0.1
SLC6A12P48065 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.44□□□□□ -0.1
SLC6A12P48065 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC6A12P48065 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.44□□□□□ -0.1
SLC6A12P48065 AC020910.5-201ENST00000623668 1865 ntBASIC14.44□□□□□ -0.1
SLC6A12P48065 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.44□□□□□ -0.1
SLC6A12P48065 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC6A12P48065 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC6A12P48065 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SLC6A12P48065 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SLC6A12P48065 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
SLC6A12P48065 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC6A12P48065 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SLC6A12P48065 AP000593.2-201ENST00000542775 1433 ntBASIC14.44□□□□□ -0.1
SLC6A12P48065 CU639417.3-201ENST00000624240 1404 ntBASIC14.44□□□□□ -0.1
SLC6A12P48065 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SLC6A12P48065 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC6A12P48065 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC6A12P48065 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC6A12P48065 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC6A12P48065 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC6A12P48065 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
SLC6A12P48065 COX5BP8-201ENST00000416911 349 ntBASIC14.44□□□□□ -0.1
SLC6A12P48065 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC14.44□□□□□ -0.1
SLC6A12P48065 TTTY23B-201ENST00000442790 549 ntBASIC14.44□□□□□ -0.1
SLC6A12P48065 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.44□□□□□ -0.1
SLC6A12P48065 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.44□□□□□ -0.1
SLC6A12P48065 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SLC6A12P48065 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.44□□□□□ -0.1
SLC6A12P48065 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.44□□□□□ -0.1
SLC6A12P48065 AC132938.2-201ENST00000579188 680 ntBASIC14.44□□□□□ -0.1
SLC6A12P48065 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.44□□□□□ -0.1
SLC6A12P48065 AC233724.13-201ENST00000598383 410 ntBASIC14.44□□□□□ -0.1
SLC6A12P48065 AL591163.1-201ENST00000641757 987 ntBASIC14.44□□□□□ -0.1
SLC6A12P48065 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC6A12P48065 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.44□□□□□ -0.1
SLC6A12P48065 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.44□□□□□ -0.1
SLC6A12P48065 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SLC6A12P48065 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC6A12P48065 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC6A12P48065 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.44□□□□□ -0.1
SLC6A12P48065 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC6A12P48065 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
SLC6A12P48065 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SLC6A12P48065 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SLC6A12P48065 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SLC6A12P48065 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC6A12P48065 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC6A12P48065 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC6A12P48065 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SLC6A12P48065 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SLC6A12P48065 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC6A12P48065 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC6A12P48065 FKBP4P6-201ENST00000457486 1332 ntBASIC14.43□□□□□ -0.1
SLC6A12P48065 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.43□□□□□ -0.1
SLC6A12P48065 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.43□□□□□ -0.1
SLC6A12P48065 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.43□□□□□ -0.1
SLC6A12P48065 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC6A12P48065 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC6A12P48065 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SLC6A12P48065 HSPA7-201ENST00000445535 1927 ntBASIC14.43□□□□□ -0.1
SLC6A12P48065 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.43□□□□□ -0.1
SLC6A12P48065 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC6A12P48065 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC6A12P48065 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC6A12P48065 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC6A12P48065 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC6A12P48065 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SLC6A12P48065 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC14.43□□□□□ -0.1
SLC6A12P48065 RN7SKP175-201ENST00000408472 289 ntBASIC14.43□□□□□ -0.1
SLC6A12P48065 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.43□□□□□ -0.1
SLC6A12P48065 BCRP2-202ENST00000447763 634 ntBASIC14.43□□□□□ -0.1
SLC6A12P48065 BCRP6-201ENST00000510112 632 ntBASIC14.43□□□□□ -0.1
SLC6A12P48065 BCRP7-201ENST00000511549 544 ntBASIC14.43□□□□□ -0.1
SLC6A12P48065 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.43□□□□□ -0.1
SLC6A12P48065 AC106820.3-201ENST00000561653 397 ntBASIC14.43□□□□□ -0.1
SLC6A12P48065 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
SLC6A12P48065 ECM1P1-201ENST00000604092 1279 ntBASIC14.43□□□□□ -0.1
SLC6A12P48065 AP001002.3-201ENST00000623482 206 ntBASIC14.43□□□□□ -0.1
SLC6A12P48065 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.43□□□□□ -0.1
SLC6A12P48065 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.43□□□□□ -0.1
SLC6A12P48065 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms