Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
THBS4P35443 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
THBS4P35443 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
THBS4P35443 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
THBS4P35443 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
THBS4P35443 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
THBS4P35443 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
THBS4P35443 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
THBS4P35443 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.27□□□□□ -0.28
THBS4P35443 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
THBS4P35443 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
THBS4P35443 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
THBS4P35443 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.27□□□□□ -0.29
THBS4P35443 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.27□□□□□ -0.29
THBS4P35443 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
THBS4P35443 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
THBS4P35443 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
THBS4P35443 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
THBS4P35443 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.27□□□□□ -0.29
THBS4P35443 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
THBS4P35443 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.27□□□□□ -0.29
THBS4P35443 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
THBS4P35443 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC13.27□□□□□ -0.29
THBS4P35443 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.27□□□□□ -0.29
THBS4P35443 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.27□□□□□ -0.29
THBS4P35443 USP32P1-208ENST00000506594 1164 ntBASIC13.27□□□□□ -0.29
THBS4P35443 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.27□□□□□ -0.29
THBS4P35443 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.27□□□□□ -0.29
THBS4P35443 AC068587.3-201ENST00000526613 355 ntBASIC13.27□□□□□ -0.29
THBS4P35443 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.27□□□□□ -0.29
THBS4P35443 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.27□□□□□ -0.29
THBS4P35443 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.27□□□□□ -0.29
THBS4P35443 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.27□□□□□ -0.29
THBS4P35443 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.27□□□□□ -0.29
THBS4P35443 AC233724.13-201ENST00000598383 410 ntBASIC13.27□□□□□ -0.29
THBS4P35443 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.27□□□□□ -0.29
THBS4P35443 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.27□□□□□ -0.29
THBS4P35443 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.27□□□□□ -0.29
THBS4P35443 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.27□□□□□ -0.29
THBS4P35443 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
THBS4P35443 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.27□□□□□ -0.29
THBS4P35443 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
THBS4P35443 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
THBS4P35443 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.27□□□□□ -0.29
THBS4P35443 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
THBS4P35443 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
THBS4P35443 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
THBS4P35443 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
THBS4P35443 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.27□□□□□ -0.29
THBS4P35443 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
THBS4P35443 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
THBS4P35443 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
THBS4P35443 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
THBS4P35443 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
THBS4P35443 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
THBS4P35443 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
THBS4P35443 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
THBS4P35443 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
THBS4P35443 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
THBS4P35443 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
THBS4P35443 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
THBS4P35443 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
THBS4P35443 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
THBS4P35443 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
THBS4P35443 AC007686.3-201ENST00000619017 3487 ntBASIC13.26□□□□□ -0.29
THBS4P35443 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
THBS4P35443 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
THBS4P35443 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
THBS4P35443 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
THBS4P35443 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
THBS4P35443 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
THBS4P35443 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
THBS4P35443 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
THBS4P35443 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
THBS4P35443 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
THBS4P35443 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
THBS4P35443 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
THBS4P35443 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
THBS4P35443 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
THBS4P35443 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.26□□□□□ -0.29
THBS4P35443 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.26□□□□□ -0.29
THBS4P35443 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
THBS4P35443 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
THBS4P35443 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.26□□□□□ -0.29
THBS4P35443 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
THBS4P35443 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
THBS4P35443 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
THBS4P35443 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.26□□□□□ -0.29
THBS4P35443 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
THBS4P35443 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
THBS4P35443 AC079776.1-201ENST00000401540 1152 ntBASIC13.26□□□□□ -0.29
THBS4P35443 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.26□□□□□ -0.29
THBS4P35443 BAATP1-201ENST00000412284 1225 ntBASIC13.26□□□□□ -0.29
THBS4P35443 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.26□□□□□ -0.29
THBS4P35443 ARSEP1-201ENST00000420443 635 ntBASIC13.26□□□□□ -0.29
THBS4P35443 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
THBS4P35443 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.26□□□□□ -0.29
THBS4P35443 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.26□□□□□ -0.29
THBS4P35443 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
THBS4P35443 AC244107.1-201ENST00000442033 332 ntBASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms