Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD40LGP29965 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CD40LGP29965 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD40LGP29965 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.39□□□□□ -0.27
CD40LGP29965 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CD40LGP29965 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD40LGP29965 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD40LGP29965 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD40LGP29965 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CD40LGP29965 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CD40LGP29965 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CD40LGP29965 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
CD40LGP29965 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD40LGP29965 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.39□□□□□ -0.27
CD40LGP29965 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD40LGP29965 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD40LGP29965 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CD40LGP29965 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CD40LGP29965 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD40LGP29965 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD40LGP29965 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD40LGP29965 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CD40LGP29965 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD40LGP29965 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD40LGP29965 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
CD40LGP29965 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC13.39□□□□□ -0.27
CD40LGP29965 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.39□□□□□ -0.27
CD40LGP29965 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC13.39□□□□□ -0.27
CD40LGP29965 CD63-210ENST00000550776 870 ntTSL 5 BASIC13.39□□□□□ -0.27
CD40LGP29965 CAND2-206ENST00000626378 333 ntTSL 5 BASIC13.39□□□□□ -0.27
CD40LGP29965 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD40LGP29965 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD40LGP29965 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC13.39□□□□□ -0.27
CD40LGP29965 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CD40LGP29965 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CD40LGP29965 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD40LGP29965 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CD40LGP29965 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.39□□□□□ -0.27
CD40LGP29965 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
CD40LGP29965 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD40LGP29965 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.39□□□□□ -0.27
CD40LGP29965 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CD40LGP29965 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD40LGP29965 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD40LGP29965 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.39□□□□□ -0.27
CD40LGP29965 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD40LGP29965 AC012617.1-204ENST00000586340 2305 ntBASIC13.39□□□□□ -0.27
CD40LGP29965 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CD40LGP29965 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD40LGP29965 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD40LGP29965 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CD40LGP29965 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CD40LGP29965 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CD40LGP29965 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CD40LGP29965 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC13.38□□□□□ -0.27
CD40LGP29965 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CD40LGP29965 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD40LGP29965 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CD40LGP29965 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CD40LGP29965 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CD40LGP29965 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC13.38□□□□□ -0.27
CD40LGP29965 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC13.38□□□□□ -0.27
CD40LGP29965 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD40LGP29965 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD40LGP29965 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CD40LGP29965 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD40LGP29965 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.38□□□□□ -0.27
CD40LGP29965 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD40LGP29965 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD40LGP29965 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC13.38□□□□□ -0.27
CD40LGP29965 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CD40LGP29965 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC13.38□□□□□ -0.27
CD40LGP29965 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CD40LGP29965 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.38□□□□□ -0.27
CD40LGP29965 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CD40LGP29965 KRT18P34-201ENST00000488218 1270 ntBASIC13.38□□□□□ -0.27
CD40LGP29965 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.38□□□□□ -0.27
CD40LGP29965 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC13.38□□□□□ -0.27
CD40LGP29965 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD40LGP29965 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC13.38□□□□□ -0.27
CD40LGP29965 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC13.38□□□□□ -0.27
CD40LGP29965 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CD40LGP29965 MIR4515-201ENST00000584082 81 ntBASIC13.38□□□□□ -0.27
CD40LGP29965 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.38□□□□□ -0.27
CD40LGP29965 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CD40LGP29965 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC13.38□□□□□ -0.27
CD40LGP29965 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD40LGP29965 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.38□□□□□ -0.27
CD40LGP29965 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD40LGP29965 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD40LGP29965 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD40LGP29965 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD40LGP29965 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD40LGP29965 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.38□□□□□ -0.27
CD40LGP29965 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD40LGP29965 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD40LGP29965 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.38□□□□□ -0.27
CD40LGP29965 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CD40LGP29965 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CD40LGP29965 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms