Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
RAB4AP20338 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RAB4AP20338 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC11.61□□□□□ -0.55
RAB4AP20338 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC11.61□□□□□ -0.55
RAB4AP20338 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
RAB4AP20338 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RAB4AP20338 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
RAB4AP20338 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
RAB4AP20338 CYP51A1P2-201ENST00000419457 1499 ntBASIC11.61□□□□□ -0.55
RAB4AP20338 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
RAB4AP20338 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC11.61□□□□□ -0.55
RAB4AP20338 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC11.61□□□□□ -0.55
RAB4AP20338 KDM5B-203ENST00000367265 10345 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RAB4AP20338 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
RAB4AP20338 STK33-217ENST00000534493 1895 ntTSL 2 BASIC11.61□□□□□ -0.55
RAB4AP20338 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
RAB4AP20338 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RAB4AP20338 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RAB4AP20338 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
RAB4AP20338 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
RAB4AP20338 PCDHGA8-202ENST00000610569 6480 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
RAB4AP20338 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC11.61□□□□□ -0.55
RAB4AP20338 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
RAB4AP20338 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
RAB4AP20338 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC11.6□□□□□ -0.55
RAB4AP20338 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC11.6□□□□□ -0.55
RAB4AP20338 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RAB4AP20338 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
RAB4AP20338 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
RAB4AP20338 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RAB4AP20338 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC11.6□□□□□ -0.55
RAB4AP20338 CIT-203ENST00000392521 8708 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RAB4AP20338 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RAB4AP20338 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
RAB4AP20338 AC020658.7-201ENST00000624274 2442 ntBASIC11.6□□□□□ -0.55
RAB4AP20338 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
RAB4AP20338 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC11.6□□□□□ -0.55
RAB4AP20338 AC010969.2-201ENST00000602458 3231 ntBASIC11.6□□□□□ -0.55
RAB4AP20338 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
RAB4AP20338 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
RAB4AP20338 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC11.6□□□□□ -0.55
RAB4AP20338 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RAB4AP20338 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC11.6□□□□□ -0.55
RAB4AP20338 CAPN13-201ENST00000295055 2683 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
RAB4AP20338 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC11.6□□□□□ -0.55
RAB4AP20338 TENM3-204ENST00000511685 10896 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
RAB4AP20338 AL592490.1-201ENST00000409186 6347 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RAB4AP20338 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RAB4AP20338 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC11.6□□□□□ -0.55
RAB4AP20338 NMRAL2P-204ENST00000423298 1792 ntTSL 5 BASIC11.6□□□□□ -0.55
RAB4AP20338 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RAB4AP20338 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
RAB4AP20338 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
RAB4AP20338 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RAB4AP20338 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RAB4AP20338 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RAB4AP20338 GUK1-204ENST00000366721 689 ntTSL 3 BASIC11.6□□□□□ -0.55
RAB4AP20338 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC11.6□□□□□ -0.55
RAB4AP20338 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RAB4AP20338 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
RAB4AP20338 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
RAB4AP20338 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC11.6□□□□□ -0.55
RAB4AP20338 RBM17P3-201ENST00000417687 1192 ntBASIC11.6□□□□□ -0.55
RAB4AP20338 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC11.6□□□□□ -0.55
RAB4AP20338 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
RAB4AP20338 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC11.6□□□□□ -0.55
RAB4AP20338 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
RAB4AP20338 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC11.6□□□□□ -0.55
RAB4AP20338 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC11.6□□□□□ -0.55
RAB4AP20338 FICD-205ENST00000552758 603 ntTSL 2 BASIC11.6□□□□□ -0.55
RAB4AP20338 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC11.6□□□□□ -0.55
RAB4AP20338 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC11.6□□□□□ -0.55
RAB4AP20338 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC11.6□□□□□ -0.55
RAB4AP20338 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC11.6□□□□□ -0.55
RAB4AP20338 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC11.6□□□□□ -0.55
RAB4AP20338 MTDHP4-201ENST00000600287 670 ntBASIC11.6□□□□□ -0.55
RAB4AP20338 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
RAB4AP20338 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
RAB4AP20338 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
RAB4AP20338 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
RAB4AP20338 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
RAB4AP20338 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
RAB4AP20338 NEDD4L-208ENST00000456173 4978 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RAB4AP20338 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RAB4AP20338 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RAB4AP20338 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RAB4AP20338 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RAB4AP20338 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RAB4AP20338 HECW2-202ENST00000409111 6692 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RAB4AP20338 OS9-218ENST00000551035 2246 ntTSL 2 BASIC11.6□□□□□ -0.55
RAB4AP20338 SERINC5-202ENST00000507668 6479 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
RAB4AP20338 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC11.6□□□□□ -0.55
RAB4AP20338 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RAB4AP20338 SLC45A4-203ENST00000519067 7483 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
RAB4AP20338 TMPRSS13-205ENST00000526090 2592 ntTSL 2 BASIC11.6□□□□□ -0.55
RAB4AP20338 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC11.6□□□□□ -0.55
RAB4AP20338 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC11.6□□□□□ -0.55
RAB4AP20338 RNF115-202ENST00000582693 9117 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RAB4AP20338 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
RAB4AP20338 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms