Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
DEFA4P12838 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
DEFA4P12838 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.32□□□□□ -0.44
DEFA4P12838 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
DEFA4P12838 AC084364.1-201ENST00000551967 1556 ntBASIC12.32□□□□□ -0.44
DEFA4P12838 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
DEFA4P12838 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
DEFA4P12838 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.32□□□□□ -0.44
DEFA4P12838 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
DEFA4P12838 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
DEFA4P12838 KLK8-202ENST00000320838 456 ntTSL 5 BASIC12.32□□□□□ -0.44
DEFA4P12838 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
DEFA4P12838 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
DEFA4P12838 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
DEFA4P12838 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC12.32□□□□□ -0.44
DEFA4P12838 SLBP-205ENST00000488267 987 ntTSL 2 BASIC12.32□□□□□ -0.44
DEFA4P12838 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC12.32□□□□□ -0.44
DEFA4P12838 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC12.32□□□□□ -0.44
DEFA4P12838 IGHV3-42-201ENST00000520410 361 ntBASIC12.32□□□□□ -0.44
DEFA4P12838 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
DEFA4P12838 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC12.32□□□□□ -0.44
DEFA4P12838 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.32□□□□□ -0.44
DEFA4P12838 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC12.32□□□□□ -0.44
DEFA4P12838 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC12.32□□□□□ -0.44
DEFA4P12838 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC12.32□□□□□ -0.44
DEFA4P12838 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC12.32□□□□□ -0.44
DEFA4P12838 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC12.32□□□□□ -0.44
DEFA4P12838 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC12.32□□□□□ -0.44
DEFA4P12838 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
DEFA4P12838 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
DEFA4P12838 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
DEFA4P12838 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
DEFA4P12838 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.32□□□□□ -0.44
DEFA4P12838 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.32□□□□□ -0.44
DEFA4P12838 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.32□□□□□ -0.44
DEFA4P12838 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
DEFA4P12838 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
DEFA4P12838 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.32□□□□□ -0.44
DEFA4P12838 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
DEFA4P12838 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.32□□□□□ -0.44
DEFA4P12838 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.32□□□□□ -0.44
DEFA4P12838 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
DEFA4P12838 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.32□□□□□ -0.44
DEFA4P12838 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
DEFA4P12838 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.32□□□□□ -0.44
DEFA4P12838 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
DEFA4P12838 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.31□□□□□ -0.44
DEFA4P12838 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
DEFA4P12838 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
DEFA4P12838 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
DEFA4P12838 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
DEFA4P12838 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
DEFA4P12838 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
DEFA4P12838 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
DEFA4P12838 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
DEFA4P12838 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
DEFA4P12838 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.31□□□□□ -0.44
DEFA4P12838 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
DEFA4P12838 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.31□□□□□ -0.44
DEFA4P12838 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
DEFA4P12838 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
DEFA4P12838 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC12.31□□□□□ -0.44
DEFA4P12838 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.31□□□□□ -0.44
DEFA4P12838 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
DEFA4P12838 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
DEFA4P12838 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
DEFA4P12838 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.31□□□□□ -0.44
DEFA4P12838 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.31□□□□□ -0.44
DEFA4P12838 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC12.31□□□□□ -0.44
DEFA4P12838 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC12.31□□□□□ -0.44
DEFA4P12838 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC12.31□□□□□ -0.44
DEFA4P12838 SDHAP3-202ENST00000515467 728 ntBASIC12.31□□□□□ -0.44
DEFA4P12838 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC12.31□□□□□ -0.44
DEFA4P12838 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC12.31□□□□□ -0.44
DEFA4P12838 TIMM17BP1-201ENST00000545713 516 ntBASIC12.31□□□□□ -0.44
DEFA4P12838 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.31□□□□□ -0.44
DEFA4P12838 AC140878.1-201ENST00000565277 250 ntBASIC12.31□□□□□ -0.44
DEFA4P12838 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC12.31□□□□□ -0.44
DEFA4P12838 TEX28P1-201ENST00000613479 1221 ntBASIC12.31□□□□□ -0.44
DEFA4P12838 AL138828.2-201ENST00000615812 383 ntBASIC12.31□□□□□ -0.44
DEFA4P12838 TEX28P2-201ENST00000617764 1221 ntBASIC12.31□□□□□ -0.44
DEFA4P12838 SPDYE12P-201ENST00000618416 771 ntBASIC12.31□□□□□ -0.44
DEFA4P12838 AC023511.2-201ENST00000618803 211 ntBASIC12.31□□□□□ -0.44
DEFA4P12838 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.31□□□□□ -0.44
DEFA4P12838 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
DEFA4P12838 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.31□□□□□ -0.44
DEFA4P12838 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
DEFA4P12838 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
DEFA4P12838 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
DEFA4P12838 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
DEFA4P12838 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
DEFA4P12838 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.31□□□□□ -0.44
DEFA4P12838 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
DEFA4P12838 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.31□□□□□ -0.44
DEFA4P12838 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
DEFA4P12838 AP001267.2-201ENST00000532619 2086 ntBASIC12.31□□□□□ -0.44
DEFA4P12838 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
DEFA4P12838 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
DEFA4P12838 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
DEFA4P12838 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms