Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC16.66■□□□□ 0.26
COL11A1P12107 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC16.66■□□□□ 0.26
COL11A1P12107 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC16.66■□□□□ 0.26
COL11A1P12107 AC114947.1-202ENST00000514136 344 ntBASIC16.66■□□□□ 0.26
COL11A1P12107 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC16.66■□□□□ 0.26
COL11A1P12107 NEU3-207ENST00000534628 746 ntTSL 2 BASIC16.66■□□□□ 0.26
COL11A1P12107 AC093752.3-201ENST00000567343 901 ntBASIC16.66■□□□□ 0.26
COL11A1P12107 MIR4750-201ENST00000584564 56 ntBASIC16.66■□□□□ 0.26
COL11A1P12107 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC16.66■□□□□ 0.26
COL11A1P12107 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COL11A1P12107 AC005041.3-201ENST00000606287 649 ntBASIC16.66■□□□□ 0.26
COL11A1P12107 WT1-AS_6.1-201ENST00000614919 121 ntBASIC16.66■□□□□ 0.26
COL11A1P12107 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC16.66■□□□□ 0.26
COL11A1P12107 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
COL11A1P12107 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COL11A1P12107 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC16.66■□□□□ 0.26
COL11A1P12107 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
COL11A1P12107 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
COL11A1P12107 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC16.66■□□□□ 0.26
COL11A1P12107 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
COL11A1P12107 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COL11A1P12107 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL11A1P12107 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL11A1P12107 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL11A1P12107 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL11A1P12107 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.66■□□□□ 0.26
COL11A1P12107 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
COL11A1P12107 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.66■□□□□ 0.26
COL11A1P12107 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.66■□□□□ 0.26
COL11A1P12107 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
COL11A1P12107 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
COL11A1P12107 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COL11A1P12107 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL11A1P12107 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL11A1P12107 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC16.66■□□□□ 0.26
COL11A1P12107 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.66■□□□□ 0.26
COL11A1P12107 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
COL11A1P12107 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL11A1P12107 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
COL11A1P12107 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.66■□□□□ 0.26
COL11A1P12107 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL11A1P12107 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL11A1P12107 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
COL11A1P12107 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL11A1P12107 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COL11A1P12107 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
COL11A1P12107 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC16.66■□□□□ 0.26
COL11A1P12107 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC16.66■□□□□ 0.26
COL11A1P12107 CHCHD2P9-201ENST00000461726 456 ntBASIC16.66■□□□□ 0.26
COL11A1P12107 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC16.66■□□□□ 0.26
COL11A1P12107 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC16.66■□□□□ 0.26
COL11A1P12107 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
COL11A1P12107 MIR6769A-201ENST00000617340 73 ntBASIC16.66■□□□□ 0.26
COL11A1P12107 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL11A1P12107 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
COL11A1P12107 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL11A1P12107 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL11A1P12107 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC16.65■□□□□ 0.26
COL11A1P12107 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL11A1P12107 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL11A1P12107 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COL11A1P12107 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL11A1P12107 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL11A1P12107 HYMAI-201ENST00000635591 3347 ntBASIC16.65■□□□□ 0.26
COL11A1P12107 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC16.65■□□□□ 0.26
COL11A1P12107 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL11A1P12107 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
COL11A1P12107 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
COL11A1P12107 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC16.65■□□□□ 0.26
COL11A1P12107 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC16.65■□□□□ 0.26
COL11A1P12107 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC16.65■□□□□ 0.26
COL11A1P12107 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC16.65■□□□□ 0.26
COL11A1P12107 POLD4-208ENST00000532830 904 ntTSL 3 BASIC16.65■□□□□ 0.26
COL11A1P12107 AP001065.2-201ENST00000617205 644 ntBASIC16.65■□□□□ 0.26
COL11A1P12107 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL11A1P12107 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COL11A1P12107 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL11A1P12107 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
COL11A1P12107 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC16.65■□□□□ 0.26
COL11A1P12107 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL11A1P12107 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
COL11A1P12107 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL11A1P12107 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL11A1P12107 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL11A1P12107 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL11A1P12107 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
COL11A1P12107 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
COL11A1P12107 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL11A1P12107 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
COL11A1P12107 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL11A1P12107 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL11A1P12107 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
COL11A1P12107 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.64■□□□□ 0.25
COL11A1P12107 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC16.64■□□□□ 0.25
COL11A1P12107 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.64■□□□□ 0.25
COL11A1P12107 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL11A1P12107 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.64■□□□□ 0.25
COL11A1P12107 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
COL11A1P12107 DNAJB1P1-201ENST00000429417 1024 ntBASIC16.64■□□□□ 0.25
COL11A1P12107 AL512306.1-201ENST00000432698 848 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms