Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RARAP10276 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RARAP10276 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RARAP10276 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RARAP10276 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RARAP10276 AC023090.2-201ENST00000625182 2110 ntBASIC15.8■□□□□ 0.12
RARAP10276 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.8■□□□□ 0.12
RARAP10276 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.8■□□□□ 0.12
RARAP10276 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.8■□□□□ 0.12
RARAP10276 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.8■□□□□ 0.12
RARAP10276 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RARAP10276 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RARAP10276 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RARAP10276 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RARAP10276 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC15.8■□□□□ 0.12
RARAP10276 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RARAP10276 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RARAP10276 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RARAP10276 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
RARAP10276 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RARAP10276 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RARAP10276 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RARAP10276 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.79■□□□□ 0.12
RARAP10276 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RARAP10276 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RARAP10276 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.79■□□□□ 0.12
RARAP10276 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RARAP10276 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
RARAP10276 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.79■□□□□ 0.12
RARAP10276 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RARAP10276 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.79■□□□□ 0.12
RARAP10276 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RARAP10276 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RARAP10276 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RARAP10276 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
RARAP10276 AC152010.1-201ENST00000415779 2006 ntBASIC15.79■□□□□ 0.12
RARAP10276 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RARAP10276 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.79■□□□□ 0.12
RARAP10276 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RARAP10276 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RARAP10276 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.79■□□□□ 0.12
RARAP10276 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RARAP10276 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RARAP10276 RNU1-114P-201ENST00000365297 166 ntBASIC15.79■□□□□ 0.12
RARAP10276 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
RARAP10276 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.79■□□□□ 0.12
RARAP10276 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
RARAP10276 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RARAP10276 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.79■□□□□ 0.12
RARAP10276 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.79■□□□□ 0.12
RARAP10276 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.79■□□□□ 0.12
RARAP10276 AC133539.2-201ENST00000604757 467 ntBASIC15.79■□□□□ 0.12
RARAP10276 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.79■□□□□ 0.12
RARAP10276 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
RARAP10276 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RARAP10276 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RARAP10276 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
RARAP10276 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RARAP10276 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RARAP10276 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RARAP10276 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
RARAP10276 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RARAP10276 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RARAP10276 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RARAP10276 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RARAP10276 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RARAP10276 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RARAP10276 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RARAP10276 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.78■□□□□ 0.12
RARAP10276 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.78■□□□□ 0.12
RARAP10276 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RARAP10276 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RARAP10276 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.78■□□□□ 0.12
RARAP10276 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RARAP10276 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RARAP10276 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RARAP10276 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.78■□□□□ 0.12
RARAP10276 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RARAP10276 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.78■□□□□ 0.12
RARAP10276 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
RARAP10276 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RARAP10276 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RARAP10276 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RARAP10276 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
RARAP10276 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RARAP10276 PIN1P1-201ENST00000412108 996 ntBASIC15.78■□□□□ 0.12
RARAP10276 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RARAP10276 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RARAP10276 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RARAP10276 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RARAP10276 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.78■□□□□ 0.12
RARAP10276 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.78■□□□□ 0.12
RARAP10276 AC005252.2-201ENST00000624630 1141 ntBASIC15.78■□□□□ 0.12
RARAP10276 AC012183.1-201ENST00000625197 499 ntBASIC15.78■□□□□ 0.12
RARAP10276 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RARAP10276 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.78■□□□□ 0.12
RARAP10276 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RARAP10276 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
RARAP10276 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RARAP10276 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms